KPMP / Cell-State-Atlas-2022Links
Code for a multimodal atlas of healthy and injured cell states and niches in the human kidney
☆21Updated last year
Alternatives and similar repositories for Cell-State-Atlas-2022
Users that are interested in Cell-State-Atlas-2022 are comparing it to the libraries listed below
Sorting:
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆40Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 9 months ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated last year
- Code used to process the data of the HBCA project☆32Updated last year
- ☆39Updated 2 years ago
- ☆58Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- iterative clustering pipeline of big single cell datasets.☆33Updated 2 weeks ago
- Collection of scripts for analysis of pan fetal immune atlas☆28Updated 3 years ago
- ☆27Updated 2 weeks ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated last month
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Integration of gut cell atlases☆27Updated 7 months ago
- ☆56Updated 3 weeks ago
- ☆31Updated 2 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆32Updated 9 months ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated 2 years ago
- ☆45Updated 3 months ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆45Updated 3 years ago
- ☆21Updated 2 years ago
- ☆37Updated 3 years ago
- Code repository for single-cell atlas of Alzheimer's disease progression across brain regions☆39Updated last year
- Spatial transcriptomics of heart tissue☆25Updated 3 years ago
- ☆20Updated 2 months ago
- ☆53Updated 2 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- R package for pathway analysis in scRNA-seq data☆75Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year