KPMP / Cell-State-Atlas-2022Links
Code for a multimodal atlas of healthy and injured cell states and niches in the human kidney
☆24Updated last year
Alternatives and similar repositories for Cell-State-Atlas-2022
Users that are interested in Cell-State-Atlas-2022 are comparing it to the libraries listed below
Sorting:
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆30Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 5 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆29Updated 3 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 5 months ago
- Gene group activity utility functions for Scanpy☆99Updated last year
- Computational pipeline to process EasySci-RNA data.☆22Updated last year
- ☆40Updated 2 years ago
- R package for pathway analysis in scRNA-seq data☆77Updated last year
- ☆37Updated 3 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- ☆61Updated 2 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- ☆34Updated 2 months ago
- Integration of gut cell atlases☆32Updated 2 months ago
- ☆61Updated 4 months ago
- ☆25Updated 2 years ago
- Code repository for single cell RNA-seq☆39Updated 5 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆36Updated 2 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆32Updated last year
- ☆16Updated 3 years ago
- Code used to process the data of the HBCA project☆32Updated last year
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 3 years ago
- Draw phylogenetic trees of tumor evolution☆87Updated 2 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆94Updated 7 months ago
- Spatial Cellular Estimator for Tumors☆60Updated 2 weeks ago
- ☆17Updated 2 years ago
- ☆41Updated 4 years ago