jwfoley / bioanalyzeRLinks
R tools for Agilent electrophoresis data
☆45Updated last year
Alternatives and similar repositories for bioanalyzeR
Users that are interested in bioanalyzeR are comparing it to the libraries listed below
Sorting:
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆115Updated 5 months ago
- Check strandedness of RNA-Seq fastq files☆124Updated 2 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆81Updated 5 months ago
- A tool for bigWig files.☆119Updated 7 years ago
- WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery☆105Updated 4 years ago
- Tip and tricks for BAM files☆85Updated 6 years ago
- This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.☆86Updated 5 months ago
- csf fork of fastqc for usage on selected reads of unaligned bam file☆49Updated 12 years ago
- Publication quality NGS track plotting☆114Updated 3 years ago
- RNA-Seq analysis workflow☆104Updated 4 years ago
- Learning the Variant Call Format☆140Updated last year
- HMMRATAC peak caller for ATAC-seq data☆100Updated 8 months ago
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆68Updated this week
- Command-line tool for the visualization of splicing events across multiple samples☆130Updated last year
- Generate IGV style locus tracks from bigWig files in R☆164Updated 8 months ago
- A pipeline for differential expression and differential alternative splicing analysis☆67Updated last year
- ☆50Updated 4 years ago
- Visualizing transcript structure and annotation using ggplot2☆158Updated 10 months ago
- Assignment of known mutational signatures to individual samples and individual somatic mutations☆58Updated last month
- ☆62Updated last year
- ☆72Updated 3 years ago
- ☆69Updated 2 years ago
- Ultraperformant reimplementation of SICER☆56Updated 3 years ago
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- Reduce + Visualize Gene Ontology☆30Updated 2 months ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆59Updated 4 years ago
- Battenberg algorithm and associated implementation script☆53Updated 4 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆70Updated 6 months ago
- Tools for analyzing DNA methylation data☆42Updated last week
- BISulfite-seq CUI Toolkit☆65Updated 6 months ago