ivanek / GvizLinks
This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.
☆86Updated 6 months ago
Alternatives and similar repositories for Gviz
Users that are interested in Gviz are comparing it to the libraries listed below
Sorting:
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆72Updated last month
- Visualizing transcript structure and annotation using ggplot2☆158Updated 11 months ago
- HMMRATAC peak caller for ATAC-seq data☆99Updated 8 months ago
- An R interface to the MEME Suite☆52Updated last month
- Publication quality NGS track plotting☆114Updated 3 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆116Updated 6 months ago
- Command-line tool for the visualization of splicing events across multiple samples☆130Updated last year
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆59Updated 5 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆81Updated 6 months ago
- Tutorial Website☆59Updated 4 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- Generate IGV style locus tracks from bigWig files in R☆167Updated 9 months ago
- GENome Organisation Visual Analytics☆79Updated 6 months ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- Enhanced version of the FastQTL QTL mapper☆67Updated 2 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆89Updated 4 months ago
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆68Updated this week
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 6 years ago
- Motif manipulation functions for R.☆30Updated 3 months ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆50Updated 2 weeks ago
- R package containing useful functions for mutational signature analysis☆83Updated this week
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆70Updated 6 months ago
- ☆30Updated 7 years ago
- ATAC-seq snakemake pipeline☆89Updated 5 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆67Updated 2 weeks ago
- ☆50Updated 4 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆62Updated last year
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆78Updated 3 years ago