Alternatives and similar repositories for dkm

Users that are interested in dkm are comparing it to the libraries listed below

• jostmey / MaxSnippetModel
  Statistical classifier for immune repertoires
  ☆45Updated 2 years ago
• flag0010 / pop_gen_cnn
  ☆80Updated last year
• daquang / YAMDA
  Yet Another Motif Discovery Algorithm
  ☆53Updated 6 years ago
• meiyulee / continuous_Bernoulli
  There are C language computer programs about the simulator, transformation, and test statistic of continuous Bernoulli distribution. More…
  ☆25Updated last year
• BorgwardtLab / S3M
  A software package for statistically significant shapelet mining
  ☆53Updated 2 years ago
• david-r-cox / Gene2vec
  Vector space representation of genetic data
  ☆36Updated 8 years ago
• idekerlab / DCell
  DCell browser and gene deletion simulator
  ☆123Updated 2 years ago
• jmschrei / rambutan
  Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.
  ☆21Updated 6 years ago
• getcrest / AutoOut
  Automated Outlier Detection and Treatment Tool
  ☆102Updated 2 years ago
• Dobiasd / treebomination
  convert a scikit-learn decision tree into a Keras model
  ☆39Updated last year
• jmschrei / avocado
  Avocado is a multi-scale deep tensor factorization model that learns a latent representation of the human epigenome and enables imputatio…
  ☆119Updated 3 years ago
• herqooly / herqooly
  Interactive Computing for Humans
  ☆70Updated 3 years ago
• wangyi-fudan / wyHLL
  The dream accurate approximate set cardinality estimator based on 3-bit HyperLogLog. More accurate than Redis HyperLogLog.
  ☆55Updated 4 years ago
• greenelab / adage
  Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …
  ☆61Updated 9 years ago
• ismms-himc / clustergrammer2-notebooks
  Examples using Clustergrammer2 to explore high-dimensional datasets.
  ☆40Updated 4 years ago
• kipoi / models
  Model zoo for genomics
  ☆166Updated 10 months ago
• kundajelab / dfim
  Deep Feature Interaction Maps (DFIM)
  ☆53Updated 6 years ago
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆43Updated 5 years ago
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆49Updated last year
• CelVoxes / ceLLama
  Cell type annotation with local Large Language Models (LLMs) - Ensuring privacy and speed with extensive customized reports
  ☆148Updated 7 months ago
• David-OConnor / plascad
  ☆119Updated last week
• QData / DeepMotif
  Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications
  ☆46Updated 6 years ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated last week
• budach / pysster
  pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks
  ☆86Updated 5 years ago
• chanzuckerberg / ExpressionMatrix2
  Software for exploration of gene expression data from single-cell RNA sequencing.
  ☆28Updated 5 years ago
• ueser / FIDDLE
  Flexible Integration of Data with Deep LEarning
  ☆50Updated 2 years ago
• jostmey / msm
  Improved statistical classifier for immune repertoires
  ☆176Updated 2 years ago
• mlin / GenomicSQLite
  Genomics Extension for SQLite
  ☆164Updated 9 months ago
• biowasm / aioli
  Framework for building fast genomics web tools with WebAssembly and WebWorkers
  ☆113Updated last month
• CDCgov / SARS-CoV-2_Sequencing
  A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.
  ☆348Updated 2 years ago