Statistical classifier for immune repertoires
☆45Oct 2, 2022Updated 3 years ago
Alternatives and similar repositories for MaxSnippetModel
Users that are interested in MaxSnippetModel are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline to call somatic cancer neoantigens from mutations in patient tumor DNA☆14Feb 16, 2023Updated 3 years ago
- Dynamic Kernel Matching (DKM) for Classifying Data with Non-conforming Features☆94May 16, 2023Updated 3 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆26Feb 8, 2022Updated 4 years ago
- QBRC Somatic Mutation Calling Pipeline☆16Feb 8, 2022Updated 4 years ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 5 years ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆76Updated this week
- An algorithm for error-correction of immunosequencing Illumina MiSeq reads and immunoproteogenomic analysis☆18Nov 1, 2018Updated 7 years ago
- Python for HLA analysis: summary, association analysis, zygosity test and interaction test☆37Apr 8, 2026Updated 5 months ago
- two strange things to do with neural nets☆15Feb 18, 2019Updated 7 years ago
- ☆15Oct 11, 2019Updated 6 years ago
- Automatic Differentiation via Contour Integration☆53Apr 22, 2023Updated 3 years ago
- An R package for classification of immune subtypes, in cancer, using gene expression data.☆48Mar 6, 2026Updated 6 months ago
- Published at Bioinformatics☆12Jul 4, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆14Mar 18, 2022Updated 4 years ago
- Convolutional neural network for categorising prostate cancer from MRI images.☆11Jul 22, 2020Updated 6 years ago
- ☆13Feb 16, 2019Updated 7 years ago
- Read contamination removal☆25Jan 24, 2024Updated 2 years ago
- flexible CDR based distance metrics☆75Dec 16, 2025Updated 9 months ago
- Open Toolkit for Painless Object Detection☆119Nov 21, 2022Updated 3 years ago
- Modification-induced misincorporation tRNA sequencing☆26Apr 29, 2026Updated 4 months ago
- Methods and analysis for Garcia-Nieto, et al. Somatic mutations☆17Jan 5, 2020Updated 6 years ago
- A clojure implementation of parsing with derivatives☆17Mar 6, 2014Updated 12 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆26Jun 16, 2026Updated 3 months ago
- AIRR Community Data Standards☆41Sep 17, 2026Updated last week
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆65Updated this week
- R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.☆17Aug 26, 2025Updated last year
- Metagenome sequencing pipeline 宏基因组分析流程☆12Aug 29, 2022Updated 4 years ago
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆22Mar 27, 2020Updated 6 years ago
- ☆38Nov 27, 2023Updated 2 years ago
- Prototypes of differentiable differential equation solvers in JAX.☆27Feb 3, 2020Updated 6 years ago
- Mycobacterium tuberculosis complex lineage typing☆10Jun 22, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- My exposition of the formalization of Hegel's theory in modal homotopy type theory☆14Aug 18, 2023Updated 3 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆29Feb 12, 2021Updated 5 years ago
- Matching T-cell receptor repertoires to a database of antigen specificities☆39Aug 18, 2026Updated last month
- RIESLING: Super-enhancer identification. (Rapid Identification of EnhancerS LInked to Nearby Genes)☆10Jun 28, 2018Updated 8 years ago
- [DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.☆40Jun 8, 2020Updated 6 years ago
- 宏基因组、代谢组和表型信息关联分析☆11Nov 15, 2018Updated 7 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆40Jul 25, 2024Updated 2 years ago