Statistical classifier for immune repertoires
☆46Oct 2, 2022Updated 3 years ago
Alternatives and similar repositories for MaxSnippetModel
Users that are interested in MaxSnippetModel are comparing it to the libraries listed below
Sorting:
- Pipeline to call somatic cancer neoantigens from mutations in patient tumor DNA☆14Feb 16, 2023Updated 3 years ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- Dockerfile for audiogrep and pocketsphinx☆12Oct 12, 2016Updated 9 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆26Feb 8, 2022Updated 4 years ago
- DEPRECATED Interfaces to common external biological tools from julia scripts and programs☆14Oct 8, 2024Updated last year
- Published at Bioinformatics☆12Jul 4, 2024Updated last year
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 4 years ago
- McKernel: A Library for Approximate Kernel Expansions in Log-linear Time.☆13Sep 3, 2022Updated 3 years ago
- database & aggregate search engine for arbitration outcomes☆17Feb 3, 2020Updated 6 years ago
- ☆13Feb 16, 2019Updated 7 years ago
- Automatically start your minecraft server when a user joins☆20Feb 27, 2026Updated last week
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆74Feb 26, 2026Updated last week
- Python for HLA analysis: summary, association analysis, zygosity test and interaction test☆38Jul 24, 2024Updated last year
- (under early development) Rust Hardware Abstraction Layer for MATRIX Creator & MATRIX Voice☆18Sep 13, 2021Updated 4 years ago
- A simple optical illusion in python☆42Oct 12, 2020Updated 5 years ago
- Methods and analysis for Garcia-Nieto, et al. Somatic mutations☆17Jan 5, 2020Updated 6 years ago
- QBRC Somatic Mutation Calling Pipeline☆16Feb 8, 2022Updated 4 years ago
- Wikipedia web crawler and Google's PageRank algorithm implementation☆20Jan 4, 2020Updated 6 years ago
- ☆38Nov 27, 2023Updated 2 years ago
- The stand-alone training engine module for the ALOHA.eu project.☆15Oct 27, 2019Updated 6 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆25Jun 21, 2022Updated 3 years ago
- 🧛 Deep generative models for TCR sequences 🧛☆17Apr 4, 2022Updated 3 years ago
- Collection of papers related to BCR repertoire analyses☆20Jan 21, 2022Updated 4 years ago
- An algorithm for error-correction of immunosequencing Illumina MiSeq reads and immunoproteogenomic analysis☆18Nov 1, 2018Updated 7 years ago
- ☆10Oct 1, 2020Updated 5 years ago
- Convolutional neural network for categorising prostate cancer from MRI images.☆11Jul 22, 2020Updated 5 years ago
- ☆11Jul 3, 2022Updated 3 years ago
- An R package for classification of immune subtypes, in cancer, using gene expression data.☆48Feb 10, 2026Updated 3 weeks ago
- Vidjil -- High-throughput Analysis of V(D)J Immune Repertoire (mirror, please go to http://gitlab.vidjil.org)☆31Dec 16, 2025Updated 2 months ago
- A pipeline for complete and accurate recovery of TCR repertoires from high throughput sequencing data.☆23Sep 10, 2023Updated 2 years ago
- Python package and command line tool for epitope prediction☆52Aug 2, 2024Updated last year
- Genetics training camp☆21Sep 8, 2020Updated 5 years ago
- Pastes contents of clipboard as plaintext, including uploading images/files to a public server and pasting the link☆30Apr 15, 2019Updated 6 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Aug 6, 2019Updated 6 years ago
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆22Mar 27, 2020Updated 5 years ago
- LLM-powered bookmark search engine☆30Jan 4, 2025Updated last year
- Read contamination removal☆25Jan 24, 2024Updated 2 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆29Feb 12, 2021Updated 5 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Oct 11, 2019Updated 6 years ago