Classifier to determine CD8+ T-cell receptor characteristics underlying peptide recognition.
☆10Jan 21, 2020Updated 6 years ago
Alternatives and similar repositories for TCR-Classifier
Users that are interested in TCR-Classifier are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predicting T Cell Receptor Specificity with Deep Learning☆10Jul 17, 2019Updated 7 years ago
- T cell Receptor and B cell Receptor assembly from single cell RNA sequencing data☆10Aug 27, 2017Updated 9 years ago
- flexible CDR based distance metrics☆76Dec 16, 2025Updated 10 months ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆37Mar 29, 2022Updated 4 years ago
- ☆17Jun 24, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆41Aug 18, 2020Updated 6 years ago
- Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)☆87Oct 6, 2021Updated 5 years ago
- predicting peptide and TCR interaction☆19Jan 27, 2021Updated 5 years ago
- [Recurrent Weighted Average](https://arxiv.org/abs/1703.01253) [Jared Ostmeyer et.al, 2017] heavily based on https://gist.github.com/sham…☆10May 18, 2017Updated 9 years ago
- An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.☆21Nov 19, 2025Updated 11 months ago
- Quantifiable predictive features define epitope-specific T cell receptor repertoires☆13Dec 8, 2022Updated 3 years ago
- RWA in pytorch☆14May 7, 2017Updated 9 years ago
- RWA recurrent neural networks☆17Apr 14, 2017Updated 9 years ago
- Reproducibility notebooks for resolVI manuscript☆14Apr 17, 2026Updated 6 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆11Jul 28, 2022Updated 4 years ago
- Grouping of Lymphocyte Interactions by Paratope Hotspots☆98Dec 4, 2020Updated 5 years ago
- Randomized Linear Algebra in Python☆13Mar 21, 2017Updated 9 years ago
- Recurrent Discounted Attention unit (RDA) for Tensorflow☆22Mar 12, 2018Updated 8 years ago
- convert a blast output to a bed file☆12Jun 19, 2015Updated 11 years ago
- A novel unsupervised batch removal framework, called iMAP, based on neural networks.☆35Jan 12, 2022Updated 4 years ago
- CDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offer…☆57Apr 3, 2024Updated 2 years ago
- ☆10Oct 22, 2018Updated 8 years ago
- Fast, efficient tool for analysis of T cell receptor repertoires (OLD VERSION)☆11Jun 20, 2017Updated 9 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆10Jun 18, 2020Updated 6 years ago
- Randomized Solvers for Large-scale Least-Squares Problems with Spark☆10May 27, 2015Updated 11 years ago
- R package implementing a simple method for CD8 T cell epitope prediction by MHC class I binding for HLA and other MHC-I molecules.☆15Sep 21, 2020Updated 6 years ago
- A package code for fitting power law distributions using Bayesian or Maximum Likelihood approaches.☆12Aug 1, 2019Updated 7 years ago
- code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm.…☆15Jan 28, 2025Updated last year
- ☆15Jul 16, 2026Updated 3 months ago
- This repository contains the source codes for the manuscript being reviewed.☆10May 20, 2017Updated 9 years ago
- ☆17Jan 29, 2025Updated last year
- ☆24Oct 3, 2026Updated 3 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆10Jan 24, 2021Updated 5 years ago
- Randomly Assembled Cyclic ADMM Quadratic Programming Solver☆18Dec 3, 2020Updated 5 years ago
- CLBLAS integration for Julia☆22Aug 22, 2023Updated 3 years ago
- A library for weather forecast!☆19Feb 24, 2024Updated 2 years ago
- library to nest multiple SVGs files into one☆12Dec 25, 2024Updated last year
- Large language modeling applied to T-cell receptor (TCR) sequences.☆61May 4, 2022Updated 4 years ago
- Integrative analysis for scRNA-seq and scTCR-/scBCR-seq data☆22Updated this week