holtjma / fmlrcLinks
a long-read error correction tool using the multi-string Burrows Wheeler Transform
☆45Updated 4 years ago
Alternatives and similar repositories for fmlrc
Users that are interested in fmlrc are comparing it to the libraries listed below
Sorting:
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- TGS scaffolding☆46Updated 3 years ago
- PacBio hybrid error correction through iterative short read consensus☆61Updated 6 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Evaluate variant calls and its combination with k-mer multiplicity☆67Updated 2 years ago
- UCSC Nanopore☆43Updated 5 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- A fast tool for hybrid genome assembly of long and short reads☆78Updated 5 years ago
- ☆44Updated 8 years ago
- A tool for Racon polishing of miniasm assemblies☆76Updated 3 weeks ago
- finshingTool☆54Updated 8 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆57Updated 2 years ago
- ☆47Updated 5 years ago
- Conditional Reciprocal Best Blast☆41Updated 8 years ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago
- Remove lambda phage reads from a fastq file☆29Updated 2 years ago
- Error correction for Illumina RNA-seq reads☆67Updated last year
- ☆62Updated last week
- HyPo: Super Fast & Accurate Polisher for Long Read Genome Assemblies☆64Updated 5 years ago
- Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing☆57Updated last year
- Error correction of ONT transcript reads☆58Updated last year
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆38Updated 2 months ago
- Estimating k-mer coverage histogram of genomics data☆77Updated last year
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆22Updated 2 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 7 months ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆74Updated 8 years ago