LooseLab / bulkvis
☆46Updated 3 months ago
Alternatives and similar repositories for bulkvis:
Users that are interested in bulkvis are comparing it to the libraries listed below
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated 11 months ago
- Error correction of ONT transcript reads☆59Updated last year
- Snakemake pipelines for nanopore sequencing data archiving and processing☆88Updated 3 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- Tools to annotate genomes using long read transcriptomics data☆45Updated 4 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆65Updated 3 months ago
- SV caller for nanopore data☆91Updated 4 years ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆34Updated 3 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆111Updated 2 months ago
- ☆79Updated 9 months ago
- Pipeline for de novo clustering of long transcriptomic reads☆26Updated 3 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated 4 months ago
- DEPRECATED - Workflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi reads☆38Updated last year
- catalog for long-read sequencing tools☆32Updated 2 years ago
- UCSC Nanopore☆43Updated 5 years ago
- ☆27Updated last week
- Filter SAM file for soft and hard clipped alignments☆47Updated 8 months ago
- Tools and software library developed by the ONT Applications group☆62Updated 4 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆99Updated 3 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆32Updated 11 months ago
- ☆29Updated 4 years ago
- Set of tools to manipulate and visualize modified base bam files☆50Updated 2 years ago
- ☆48Updated 5 months ago
- A python tool box for fast and accurate quality control, conversion and alignment of nanopore sequencing data☆20Updated 2 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 4 years ago
- Toolkit for calling structural variants using short or long reads☆100Updated 3 weeks ago
- Various scripts and recipes for working with nanopore data☆34Updated 8 years ago
- Scripts and programs for the Holt Lab's MinION desktop☆32Updated 4 years ago