LooseLab / bulkvisLinks
☆49Updated 8 months ago
Alternatives and similar repositories for bulkvis
Users that are interested in bulkvis are comparing it to the libraries listed below
Sorting:
- UCSC Nanopore☆43Updated 5 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- Error correction of ONT transcript reads☆58Updated last year
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Pipeline for de novo clustering of long transcriptomic reads☆26Updated 3 years ago
- Tools and software library developed by the ONT Applications group☆63Updated 4 years ago
- Filter SAM file for soft and hard clipped alignments☆49Updated last year
- Tools to annotate genomes using long read transcriptomics data☆45Updated 4 years ago
- Analysis pipelines from Oxford Nanopore Technologies' Research Division☆50Updated 4 years ago
- Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing☆57Updated last year
- SV caller for nanopore data☆91Updated 5 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆34Updated 4 years ago
- ☆80Updated 4 months ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆118Updated 3 months ago
- H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)☆71Updated 4 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- Structural variant caller☆54Updated 3 years ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 8 months ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 2 months ago
- Methylation Phasing for Nanopore Sequencing☆48Updated 2 years ago
- Set of tools to manipulate and visualize modified base bam files☆56Updated 2 years ago
- Toolkit for calling structural variants using short or long reads☆106Updated last month
- Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and r…☆47Updated 6 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated 9 months ago
- Remove lambda phage reads from a fastq file☆29Updated 2 years ago
- Pore-C support☆53Updated 2 years ago
- Tools for the analysis of structural variation in genomes☆79Updated last year
- ☆48Updated 10 months ago