Repository with documentation file of our Jan 22-24 workshop on Computational Population Genetics in Jena, Germany.
☆15May 9, 2019Updated 7 years ago
Alternatives and similar repositories for compPopGenWorkshop2019_docs
Users that are interested in compPopGenWorkshop2019_docs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis…☆17Updated this week
- Genome Analysis Workshop (Jena 2016) material☆18Mar 3, 2017Updated 9 years ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆27Oct 29, 2020Updated 5 years ago
- Inferring natural selection by comparative population genomic analysis across species☆27Oct 31, 2023Updated 2 years ago
- Heuristic search algorithm for fitting qpGraph models☆11Aug 4, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- MSMC2 Scripts☆28May 29, 2026Updated last month
- Compute postmortem damage patterns and decontaminate ancient genomes☆22Apr 20, 2021Updated 5 years ago
- Tools test whether admixture occurred and more☆232Jul 13, 2026Updated last week
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆25Aug 9, 2023Updated 2 years ago
- Repository for pipeline code☆26Feb 28, 2024Updated 2 years ago
- HyPhy tutorials☆11Apr 9, 2018Updated 8 years ago
- A script to extract graph structure from multiple sequence alignment result and output as GFA/JSON for vg☆11Mar 27, 2019Updated 7 years ago
- Genome-wide scan for balancing selection using beta statistic☆32Apr 26, 2023Updated 3 years ago
- This project is a collection of tools for bioinformatic processing of ancient DNA data at the Harvard Medical School Reich Lab.☆30Aug 15, 2025Updated 11 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Automatically exported from code.google.com/p/malder☆11Mar 17, 2015Updated 11 years ago
- A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.☆14May 3, 2019Updated 7 years ago
- Eigen tools by Nick Patterson and Alkes Price lab☆204Updated this week
- Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.☆11Mar 27, 2020Updated 6 years ago
- Course Materials for AAAGs 2018 Workshop☆13Aug 10, 2018Updated 7 years ago
- gargammel is an ancient DNA simulator☆39Jul 22, 2024Updated last year
- ☆24Mar 15, 2026Updated 4 months ago
- ☆13Jul 8, 2026Updated last week
- Support material for the "Comparative Genomics Laboratory" classes of the MSc in Biodiversity and Evolution at the University of Bologna.☆13Feb 27, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- GONE: Scripts, programs and an example data set☆56May 12, 2026Updated 2 months ago
- A high-throughput analysis framework for Y-chromosomal next-generation sequencing data☆17Jun 11, 2021Updated 5 years ago
- A tool for estimating time-dependent migration rates based on cross-/within-population coalescent rates from MSMC☆16Apr 6, 2025Updated last year
- A pandoc filter for applying different color on specific elements☆14Dec 17, 2024Updated last year
- Repository for the Data challenge about Software and Statistical Methods for Population Genetics (SSMPG 2017)☆14Sep 19, 2017Updated 8 years ago
- University of Manchester Computer Science Coordinated Diabetes Study Datasets☆15Oct 15, 2025Updated 9 months ago
- analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)☆12Jun 16, 2016Updated 10 years ago
- tandemtwister: Tandem repeat genotyping tool☆19Feb 1, 2026Updated 5 months ago
- ☆16Feb 11, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆14Mar 16, 2026Updated 4 months ago
- Suit of R-scripts to perform landscape genomic analyses☆15May 25, 2020Updated 6 years ago
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆46Jul 27, 2023Updated 2 years ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆34Jul 13, 2026Updated last week
- Fast and flexible inference of the distribution of fitness effects (DFE).☆16Jun 28, 2026Updated 3 weeks ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Pipeline for generating reference and perturbed sequences for input into predictive models.☆12Nov 15, 2024Updated last year