Repository with documentation file of our Jan 22-24 workshop on Computational Population Genetics in Jena, Germany.
☆15May 9, 2019Updated 7 years ago
Alternatives and similar repositories for compPopGenWorkshop2019_docs
Users that are interested in compPopGenWorkshop2019_docs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Genome Analysis Workshop (Jena 2016) material☆18Mar 3, 2017Updated 9 years ago
- Inferring natural selection by comparative population genomic analysis across species☆27Oct 31, 2023Updated 2 years ago
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆24Aug 9, 2023Updated 2 years ago
- Tools test whether admixture occurred and more☆230May 5, 2026Updated last month
- Workflow for processing Illumina sequencing runs for ancient human DNA☆26Oct 29, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Automatically exported from code.google.com/p/malder☆11Mar 17, 2015Updated 11 years ago
- Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.☆11Mar 27, 2020Updated 6 years ago
- Course Materials for AAAGs 2018 Workshop☆13Aug 10, 2018Updated 7 years ago
- A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.☆14May 3, 2019Updated 7 years ago
- MSMC2 Scripts☆28May 29, 2026Updated last week
- This book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis…☆16Apr 14, 2026Updated last month
- ☆16Feb 11, 2022Updated 4 years ago
- A pandoc filter for applying different color on specific elements☆14Dec 17, 2024Updated last year
- analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)☆12Jun 16, 2016Updated 9 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆13Oct 13, 2023Updated 2 years ago
- Compute postmortem damage patterns and decontaminate ancient genomes☆21Apr 20, 2021Updated 5 years ago
- Suit of R-scripts to perform landscape genomic analyses☆14May 25, 2020Updated 6 years ago
- Genome-wide scan for balancing selection using beta statistic☆32Apr 26, 2023Updated 3 years ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆33Jun 10, 2025Updated last year
- Script to calculate the normalized compression distance of sets of files. It also tries to parallize the work over the available processo…☆18Apr 13, 2015Updated 11 years ago
- Eigen tools by Nick Patterson and Alkes Price lab☆203Nov 3, 2023Updated 2 years ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆29Aug 21, 2018Updated 7 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- 💾 Set up full partition encryption for Ubuntu using LUKS and GRUB2 and optionally LVM and Secure Boot for multi-boot systems.☆19Jan 11, 2023Updated 3 years ago
- A script to extract graph structure from multiple sequence alignment result and output as GFA/JSON for vg☆11Mar 27, 2019Updated 7 years ago
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13May 11, 2024Updated 2 years ago
- A wikilink extension for Python Markdown☆16Jul 26, 2022Updated 3 years ago
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆13Mar 16, 2026Updated 2 months ago
- Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.☆90Jun 4, 2026Updated last week
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- ☆44Jun 1, 2026Updated last week
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆48Mar 7, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Sep 24, 2024Updated last year
- gargammel is an ancient DNA simulator☆39Jul 22, 2024Updated last year
- A pipeline creation tool using Snakemake☆13Jun 4, 2026Updated last week
- Tool for quick offline batch conversion of Genbank IDs or accessions to taxonomy strings☆14Jan 8, 2024Updated 2 years ago
- ☆27Mar 26, 2024Updated 2 years ago
- 一些关于基因组及转录组的知识☆46Dec 29, 2025Updated 5 months ago