nignatiadis / IHWLinks
Independent Hypothesis Weighting
☆15Updated 2 years ago
Alternatives and similar repositories for IHW
Users that are interested in IHW are comparing it to the libraries listed below
Sorting:
- Glimma R package☆50Updated last year
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated last year
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 3 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Bioconductor package for management of multi-assay data☆74Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- R package to identify genes with differential distributions in single-cell RNA-seq☆33Updated 3 years ago
- DESeq2 or edgeR☆22Updated 9 years ago
- Get SNP proxies from the 1000 Genomes Project.☆30Updated 7 years ago
- Explore design matrices interactively with R/Shiny☆38Updated last month
- Devel repository for minfi☆64Updated last year
- A tidy interface for coverage analysis☆31Updated 5 years ago
- Transcript quantification import with automatic metadata detection☆67Updated last week
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 3 months ago
- countsimQC - Compare characteristic features of count data sets☆29Updated last month
- Code used for the single-cell RNA-Seq batch effects paper☆10Updated 8 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆62Updated 7 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last week
- Clone of the Bioconductor repository for the basilisk package.☆29Updated last month
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated last month
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated last month
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated this week
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆45Updated last year
- Code for the Recount project☆11Updated last year
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago