jensenlab / BacterAILinks
☆25Updated last year
Alternatives and similar repositories for BacterAI
Users that are interested in BacterAI are comparing it to the libraries listed below
Sorting:
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Updated last month
- Pipeline for major biological analyses.☆35Updated 3 years ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆65Updated last week
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆43Updated 6 months ago
- ☆39Updated last month
- Bioinformatic Tools for study Evolution of metabolic diversity☆34Updated last year
- Analysing Metagenomic Species (MGS)☆41Updated 4 years ago
- PaperBLAST: find papers about a protein or its homologs☆40Updated last week
- The Microbial Co-occurrence Network Explorer☆21Updated last year
- ☆18Updated 4 years ago
- Analyses in R and Python Using curatedMetagenomicData☆32Updated 3 months ago
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆29Updated last year
- PHANOTATE: a gene caller for phages.☆78Updated 7 months ago
- Exploring the "dusk matter" of the RNA virosphere☆35Updated 3 years ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆37Updated 2 months ago
- ☆32Updated 4 months ago
- the toolbox for Microbial and personalized GEM, REactiobiome and community NEtwork modelling☆11Updated last year
- ☆45Updated 2 years ago
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆50Updated 5 months ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆34Updated 6 years ago
- MetaWIBELE: Workflow to Identify novel Bioactive Elements in microbiome☆22Updated 2 months ago
- ☆41Updated 4 years ago
- ☆30Updated 6 months ago
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome☆55Updated 3 months ago
- ☆31Updated 2 weeks ago
- A package to annotate protein sequences☆59Updated 4 months ago
- PGPg Finder is a command-line tool that offers different workflows for genome and metagenome annotation of Plant-Growth Promotion Genes. …☆22Updated last month
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆87Updated last month
- This repository contains scripts used in the manuscript "Massive expansion of human gut bacteriophage diversity"☆20Updated 4 years ago
- Predict prokaryotic host for phage metagenomic sequences☆52Updated 10 months ago