iquasere / KEGGCharter
A tool for representing genomic potential and transcriptomic expression into KEGG pathways
☆54Updated 8 months ago
Alternatives and similar repositories for KEGGCharter:
Users that are interested in KEGGCharter are comparing it to the libraries listed below
- ☆69Updated last month
- Materials and presentation for the 2023 ISB Microbiome course.☆24Updated 6 months ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆34Updated 6 years ago
- Bioinformatics tool for Locus Visualisation☆96Updated 3 weeks ago
- Bioinformatic Tools for study Evolution of metabolic diversity☆32Updated last year
- CLI tool to annotate genes with KOfam☆78Updated last year
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆91Updated last year
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆72Updated 2 years ago
- An R package designed for drawing gene arrow maps☆75Updated 3 weeks ago
- A tool for drawing ANI clustermap between all-vs-all microbial genomes☆76Updated 7 months ago
- Bacterial Genome Assembly and Assessment☆24Updated 4 months ago
- (Meta-)genome screening for functional and natural product gene sequences☆82Updated this week
- Pipeline for major biological analyses.☆34Updated 3 years ago
- MGnify genome analysis pipeline☆105Updated 2 weeks ago
- ☆49Updated last year
- Similarity networks of biosynthetic gene clusters☆104Updated this week
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆58Updated this week
- Local version of the virus identification and analysis web server (tool set)☆44Updated this week
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆61Updated 4 months ago
- ☆38Updated this week
- a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference☆71Updated last month
- A package to annotate protein sequences☆56Updated last month
- PHANOTATE: a tool to annotate phage genomes.☆73Updated 4 months ago
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆29Updated last year
- A toolkit for prokaryotic comparative genomics☆47Updated 2 months ago
- Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…☆56Updated last month
- DDBJ Fast Annotation and Submission Tool☆79Updated last month
- gutSMASH☆53Updated 3 months ago
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆47Updated 2 months ago
- Assembly methods for nanopore-based metagenomic sequencing: a comparative study☆18Updated 4 years ago