jarojasva / HADEGView external linksLinks
Repository of sequences to annotate hydrocarbon-degrading genes/proteins from genomes/metagenomes
☆12May 10, 2024Updated last year
Alternatives and similar repositories for HADEG
Users that are interested in HADEG are comparing it to the libraries listed below
Sorting:
- ☆20Mar 29, 2022Updated 3 years ago
- Conditional Auto-Regressive LASSO in R☆20Nov 11, 2022Updated 3 years ago
- Prophage Activity Estimator☆31May 30, 2024Updated last year
- ☆10May 14, 2025Updated 9 months ago
- QGIS svg icons - Animal silhouettes☆11Nov 17, 2018Updated 7 years ago
- Meta-Omics Software for Community Analysis☆37Nov 4, 2024Updated last year
- Pipeline for major biological analyses.☆36Mar 30, 2022Updated 3 years ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Oct 17, 2025Updated 3 months ago
- ☆12Mar 11, 2025Updated 11 months ago
- A fork of Prodigal meant to improve gene calling for giant viruses and viruses that use alternative genetic codes☆49Oct 12, 2023Updated 2 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 2 years ago
- Ready-to-use pipeline to detect, count and identify the hgcAB genes, involved in mercury methylation, from metagenomes☆10May 17, 2024Updated last year
- RSpace running on Docker☆12Jul 11, 2025Updated 7 months ago
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Nov 21, 2017Updated 8 years ago
- Compare microbial co-occurrence networks based on the trans_network class of microeco package☆12Jan 6, 2026Updated last month
- ☆11Feb 16, 2021Updated 4 years ago
- MicrobeRX☆15Aug 11, 2025Updated 6 months ago
- ☆14Jan 21, 2021Updated 5 years ago
- Intelligent and cost-effective bidding on cloud computing instances for bioinformatics pipelines.☆13Dec 8, 2017Updated 8 years ago
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆44Apr 4, 2023Updated 2 years ago
- accessory functions for processing microbial community data☆12Dec 24, 2022Updated 3 years ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 7 years ago
- COmpositional Zero-Inflated Network Estimation☆11Nov 20, 2023Updated 2 years ago
- Demographic inference from whole genomes☆13Oct 18, 2022Updated 3 years ago
- R package to provide data access to Semantic Scholar through their lightweight API for scientific literature.☆12Nov 21, 2025Updated 2 months ago
- Pipeline to create phage genome synteny graphics from genbank files☆14Oct 28, 2024Updated last year
- Repositório para materiais e documentos usados na II ELAB☆22Sep 26, 2024Updated last year
- ☆12Jan 29, 2025Updated last year
- detect temperate phage (active prophage) in assembled bacterial genome sequences☆14Feb 10, 2022Updated 4 years ago
- Coursera Advanced R Programming☆13Jan 18, 2023Updated 3 years ago
- ☆12Sep 14, 2025Updated 5 months ago
- ☆12May 29, 2024Updated last year
- 'alto' is an R package that aligns topics from different LDA models, computes metrics for quantifying the goodness of alignment, and prov…☆17Jun 21, 2024Updated last year
- Prediction of protein melting temperatures directly from sequences☆11Apr 16, 2024Updated last year
- From metagenomes to epitopes and beyond☆12Updated this week
- Predict prokaryotic hosts for phage (meta) genomic sequences☆11Apr 4, 2022Updated 3 years ago
- DIAMOND online documentation☆10Sep 2, 2020Updated 5 years ago
- Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study☆10Jul 13, 2018Updated 7 years ago
- renders a KEGGML file and displays a KEGG pathway☆10Jul 14, 2016Updated 9 years ago