EvoEF + evolutionary profile for ddG_bind prediction
☆14Oct 17, 2025Updated 5 months ago
Alternatives and similar repositories for SSIPe
Users that are interested in SSIPe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PCA and normal mode analysis of proteins☆20May 16, 2024Updated last year
- ☆11Apr 25, 2021Updated 4 years ago
- 🐶 hlabud: HLA genotype analysis in R☆17Apr 11, 2025Updated 11 months ago
- Python utilities for handling Rosetta output and PDB files☆16Sep 26, 2011Updated 14 years ago
- Tutorial files☆12Aug 7, 2024Updated last year
- Physical energy function for protein sequence design☆38May 6, 2023Updated 2 years ago
- some tools for working with protein (PDB) files in tensorflow☆11Jul 9, 2019Updated 6 years ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Aug 12, 2021Updated 4 years ago
- ☆15Jun 26, 2018Updated 7 years ago
- A toolkit for predicting the binding mode of small molecules interacting with proteins based on interfacial rigidification, as assessed b…☆10Nov 22, 2016Updated 9 years ago
- MMTSB Tool Set☆33Jan 26, 2026Updated last month
- ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.☆14Mar 14, 2020Updated 6 years ago
- structural antibody parser and database☆18Feb 26, 2026Updated 3 weeks ago
- Elastic Network Contact Model (coarse-grained Normal Mode Analysis software)☆14Jul 29, 2017Updated 8 years ago
- ☆15Jun 11, 2021Updated 4 years ago
- Repository of all EJP lab computational projects☆15Feb 13, 2026Updated last month
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- Colorblind-friendly, perceptually uniform palettes for pymol☆21Jan 25, 2021Updated 5 years ago
- Fast, accurate, and deterministic protein side-chain packing☆37Feb 28, 2025Updated last year
- Predict the binding affinity of protein-protein complexes from structural data☆180Oct 3, 2025Updated 5 months ago
- NeST-VNN repo☆12Jun 13, 2025Updated 9 months ago
- ☆15Jun 22, 2020Updated 5 years ago
- Modeling the effects of mutations in proteins using PyRosetta☆27Jan 26, 2018Updated 8 years ago
- Protein common interface databases☆10Apr 13, 2019Updated 6 years ago
- a toolbox for the manipulation, modelling and analysis of molecular structures☆27Nov 27, 2025Updated 3 months ago
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆31Jun 25, 2022Updated 3 years ago
- Normal Mode Analysis for Macromolecules☆18Apr 1, 2017Updated 8 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Apr 12, 2019Updated 6 years ago
- Solvent Accessible Surface calculation software for biomolecules.☆18Apr 23, 2023Updated 2 years ago
- The Visualization of Protein-Ligand Graphs software that powers the PTGL☆15Apr 4, 2024Updated last year
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- Tool(s) for cleaning, munging and analysing PDB files for structural bioinformatics analysis.☆14May 29, 2019Updated 6 years ago
- ☆10Feb 18, 2020Updated 6 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 2 years ago
- Python implementation of the Ramachandran plot☆56Jul 20, 2025Updated 8 months ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jan 26, 2025Updated last year
- CNN-SVR: A deep learning approach for predicting CRISPR/Cas9 guide RNA on-target activity☆24Apr 25, 2021Updated 4 years ago
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21May 20, 2019Updated 6 years ago
- GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the fam…☆23Jul 3, 2016Updated 9 years ago