EvoEF + evolutionary profile for ddG_bind prediction
☆15Oct 17, 2025Updated last year
Alternatives and similar repositories for SSIPe
Users that are interested in SSIPe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Physical energy function for ddG prediction upon amino acid mutation☆15May 7, 2023Updated 3 years ago
- Physical energy function for protein sequence design☆46May 6, 2023Updated 3 years ago
- ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.☆14Mar 14, 2020Updated 6 years ago
- Software for the analysis and visualization of site-saturation mutagenesis experiments☆19Apr 21, 2023Updated 3 years ago
- Deep learning architectures for protein secondary structure prediction (version 2)☆11Mar 24, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆16Jun 11, 2021Updated 5 years ago
- ☆16Jun 22, 2020Updated 6 years ago
- Predicting the effect of mutations on protein stability and protein-protein interaction affinity.☆10Mar 29, 2021Updated 5 years ago
- ☆94Sep 7, 2022Updated 4 years ago
- Repository of all EJP lab computational projects☆15Feb 13, 2026Updated 8 months ago
- Modeling the effects of mutations in proteins using PyRosetta☆27Jan 26, 2018Updated 8 years ago
- 🐶 hlabud: HLA genotype analysis in R☆19Apr 11, 2025Updated last year
- Tool(s) for cleaning, munging and analysing PDB files for structural bioinformatics analysis.☆15May 29, 2019Updated 7 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆20Apr 12, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆11Aug 5, 2020Updated 6 years ago
- TrDesign w/ Partial Hallucination support☆10Apr 29, 2022Updated 4 years ago
- ☆12Jan 2, 2021Updated 5 years ago
- PCA and normal mode analysis of proteins☆21May 16, 2024Updated 2 years ago
- ☆11Apr 25, 2021Updated 5 years ago
- Code for NeurIPS 2023 paper "AVIDa-hIL6: A Large-Scale VHH Dataset Produced from an Immunized Alpaca for Predicting Antigen-Antibody Inte…☆22Nov 19, 2024Updated last year
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆31Jun 25, 2022Updated 4 years ago
- ☆12May 16, 2020Updated 6 years ago
- Fast, accurate, and deterministic protein side-chain packing☆41Feb 28, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆25May 26, 2025Updated last year
- analyze 1D (e)ABF simulation in NAMD☆11Nov 12, 2018Updated 7 years ago
- ☆10Apr 25, 2024Updated 2 years ago
- ☆13May 24, 2026Updated 5 months ago
- Tutorial files☆12Aug 7, 2024Updated 2 years ago
- ☆161Jul 28, 2026Updated 3 months ago
- structural antibody parser and database☆27Aug 27, 2026Updated 2 months ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆28Aug 12, 2021Updated 5 years ago
- A Collection of Platform, Tools, and Resources for Antibody Engineering☆22Aug 5, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆24Mar 29, 2021Updated 5 years ago
- A computational method to optimize degenerate codons for synthesizing an informed combinatorial mutagenesis protein variant library☆17Feb 18, 2025Updated last year
- Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest☆14Mar 22, 2023Updated 3 years ago
- some tools for working with protein (PDB) files in tensorflow☆11Jul 9, 2019Updated 7 years ago
- NeST-VNN repo☆12Jun 13, 2025Updated last year
- Rosetta Funclib☆25May 9, 2020Updated 6 years ago
- Scripts and data to run AbDesign as described in Tools for protein science 2021☆13Nov 4, 2020Updated 5 years ago