Compare microbial co-occurrence networks based on the trans_network class of microeco package
β12Mar 25, 2026Updated 4 months ago
Alternatives and similar repositories for meconetcomp
Users that are interested in meconetcomp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- π¦BEEM-Static: An R package for inferring microbial interactions based on Lotka-Volterra modelsβ10Aug 24, 2021Updated 4 years ago
- β34Jun 10, 2025Updated last year
- β51May 29, 2026Updated last month
- R package for downstream Microbiome analysisβ31Dec 10, 2024Updated last year
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"β53Dec 9, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- dada2 formatted nifH databaseβ13May 17, 2024Updated 2 years ago
- R package for Generalized Dissimilarity Modelingβ38Feb 10, 2026Updated 5 months ago
- QGIS svg icons - Animal silhouettesβ14Nov 17, 2018Updated 7 years ago
- β20Jun 8, 2020Updated 6 years ago
- Normalized Stochasticity Ratio in community assemblyβ31Oct 22, 2024Updated last year
- This repository contains the generalized scripts necessary to perform the ecological analyses detailed within the manuscript titled, "Uniβ¦β19Nov 2, 2020Updated 5 years ago
- Fungal Validation and Identification Pipelineβ15Jul 13, 2026Updated last week
- a greta extension for generalised additive modelling using mgcvβ11Jan 14, 2025Updated last year
- A synthesis of bacterial and archaeal phenotypic trait dataβ36Nov 9, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Hierarchical genome assembly: de novo bacterial genome assembly using high coverage short sequencing readsβ11Dec 27, 2016Updated 9 years ago
- misFinder: Identify mis-assemblies in an unbiased manner using reference and paired-end readsβ10Oct 17, 2015Updated 10 years ago
- The copyright of ggcor belongs to HouyunHuang who closed the account of github. Refer to the Citation for detailsβ43Jun 2, 2021Updated 5 years ago
- R package for computing alpha and beta contributional diversity metricsβ11May 5, 2023Updated 3 years ago
- β10Oct 17, 2019Updated 6 years ago
- π¦ 𧬠Unraveling Viral Genomes from Metagenomesβ11Oct 3, 2025Updated 9 months ago
- A spatially explicit trait- and individual-based microbial systems modelling frameworkβ15Updated this week
- π¦ R package to compute functional diversity indices efficientlyβ44Jul 13, 2026Updated last week
- Coupled model of plant nitrogen demand and rhizosphere carbon allocation (FUN) and soil SOM cycling (CORPSE)β10May 24, 2017Updated 9 years ago
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- β12Mar 11, 2025Updated last year
- β15Sep 9, 2025Updated 10 months ago
- Nextflow pipeline designed for rapid onsite QC and variant calling of Oxford Nanopore data (following basecalling and demultiplexing withβ¦β13Jun 4, 2026Updated last month
- A simulator for horizontal gene transfer (HGT) in microbial communitiesβ10Oct 5, 2020Updated 5 years ago
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)β95Oct 1, 2025Updated 9 months ago
- R package for joint species distribution modelsβ14Nov 3, 2025Updated 8 months ago
- β13Apr 5, 2021Updated 5 years ago
- β13Dec 2, 2024Updated last year
- An R package to perform systematic quality checks on comparative genomics analysesβ12Mar 5, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Interactive multi-omics data explorer to integrate and interactively explore transcripts, proteins and metabolites data.β13Aug 7, 2025Updated 11 months ago
- ggplots for nested dataβ10Jul 17, 2024Updated 2 years ago
- mvabund updatesβ10Mar 10, 2024Updated 2 years ago
- Demographic inference from whole genomesβ13Oct 18, 2022Updated 3 years ago
- Bioinformatics with R cookbookβ14Apr 3, 2019Updated 7 years ago
- Unsupervised learning based Microbial Interaction inference method using BAyesian esTimatiOnβ10Apr 22, 2021Updated 5 years ago
- An R package for downstream data analysis of microbiome omics dataβ286Jul 11, 2026Updated 2 weeks ago