YunyiShen / CAR-LASSO
Conditional Auto-Regressive LASSO in R
☆20Updated 2 years ago
Alternatives and similar repositories for CAR-LASSO:
Users that are interested in CAR-LASSO are comparing it to the libraries listed below
- Computes affinity between two entities based on their co-occurrence☆26Updated last year
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Updated 2 weeks ago
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆14Updated 3 weeks ago
- babette is an R package to work with BEAST2☆44Updated 2 weeks ago
- R package to reconstruct ancestral networks inferred with RevBayes☆11Updated 2 weeks ago
- An R pakage to calculate diversity through Hill Numbers☆33Updated 9 months ago
- Dendrograms for Evolutionary Analysis☆11Updated 5 years ago
- ☆33Updated 3 months ago
- phylogenetic networks using ggplot2 and ggtree☆11Updated 2 years ago
- diversitree: comparative phylogenetic analyses of diversification☆33Updated 4 months ago
- rtrees: an R package to assemble phylogenetic trees from mega-trees☆32Updated 7 months ago
- Implementation of the EM algorithm for the detection of shifts in a phylogeny.☆16Updated this week
- ☆11Updated 2 years ago
- A template for creating modular shiny applications that meet academic standards and are reproducible☆18Updated this week
- Ordination lectures for Ecological Methods in Oulu☆18Updated 6 months ago
- Functions for phylogenetic analyses☆31Updated 11 months ago
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Updated 7 months ago
- Create, modify and analyse phylogenetic trees in R☆21Updated last week
- A DRAFT, early stage book on snakemake.☆18Updated last year
- Basic Tools for the Analysis of Disease Outbreaks☆12Updated 5 years ago
- ☆17Updated 3 years ago
- ☆20Updated last year
- Utilities and distributions for (birth-death) skyline models.☆10Updated 5 years ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Updated last year
- R package for creating sequence logo plots☆22Updated last year
- R package to run BEAST2☆11Updated 3 weeks ago
- The phruta R package☆9Updated 7 months ago
- ggplot2-style plots with base R graphics☆69Updated 7 months ago
- A suite of methods and models for studying evolutionary radiations☆22Updated last year
- A textbook for phylogenetic comparative methods.☆43Updated 5 years ago