biomadeira / BioDownloaderLinks
📦 A Command Line Tool for downloading protein structures, sequences and MSAs
☆10Updated 7 years ago
Alternatives and similar repositories for BioDownloader
Users that are interested in BioDownloader are comparing it to the libraries listed below
Sorting:
- Contact Prediction ToolKit☆21Updated 2 years ago
- ☆36Updated 7 months ago
- A Python workflow to study protein-protein coevolution and interaction☆21Updated 7 years ago
- A domain parser for Alphafold models☆38Updated last year
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆17Updated 6 years ago
- Contact map alignment☆41Updated 4 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆54Updated 2 months ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆60Updated 2 months ago
- Evolutionary conservation estimation of residues or nucleotides☆42Updated 3 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆88Updated last year
- PSIPRED Protein Secondary Structure Predictor☆55Updated 6 months ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- A wxPython graphical interface for the PyRosetta and Rosetta protein modeling suites☆29Updated 7 years ago
- Mutation effects predicted from sequence co-variation☆65Updated 7 years ago
- The Swiss Army knife for carbohydrate structure validation, refinement and analysis☆29Updated last week
- scripts and facilities for in-silico mutagenesis with FoldX☆56Updated 5 months ago
- Detection of remote homology by comparison of protein language model representations☆53Updated 5 months ago
- Python framework for doing ancestral sequence reconstruction☆38Updated 10 months ago
- Convert PDB residues to their Uniprot equivalents☆17Updated 5 years ago
- ☆39Updated 8 months ago
- Direct coupling analysis software for protein and RNA sequences☆50Updated 3 weeks ago
- A Python platform for Structural Bioinformatics☆56Updated 2 months ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆87Updated last year
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆45Updated 4 months ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆27Updated 9 months ago
- ☆30Updated last year
- Contact map alignment☆16Updated 7 years ago
- Python package for analysis of antibody heavy and light chains☆25Updated 4 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- ☆11Updated 5 months ago