paulgeeleher / pRRopheticLinks
R package
☆22Updated last year
Alternatives and similar repositories for pRRophetic
Users that are interested in pRRophetic are comparing it to the libraries listed below
Sorting:
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- ☆9Updated this week
- ☆40Updated 7 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 5 years ago
- ☆29Updated 6 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆11Updated 5 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- Dichotomous of innate immune landscape☆17Updated 5 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆21Updated 3 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Development repository for the multiMiR database's R API☆20Updated 9 months ago
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Updated 3 years ago
- Pseudotime Analysis for Bulk Data☆15Updated 10 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆20Updated 2 years ago
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- ☆28Updated last year
- Gene-level general linear mixed model☆22Updated 5 months ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- BioCarta pathway images☆11Updated last year
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆21Updated last year
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- An R package to plot maps of clone distributions in somatic evolution☆17Updated last year
- Superseded by https://github.com/MD-Anderson-Bioinformatics/BatchEffectsPackage☆12Updated 4 years ago
- R package for tissue-specific gene enrichment☆14Updated 3 years ago
- Calculating Tumor microenvironment score☆29Updated 2 years ago