junjunlab / bulkPseudotimeLinks
Pseudotime Analysis for Bulk Data
β18Updated last year
Alternatives and similar repositories for bulkPseudotime
Users that are interested in bulkPseudotime are comparing it to the libraries listed below
Sorting:
- π― tigeR: Tumor Immunotherapy Gene Expression Data Analysis R packageβ35Updated 6 months ago
- The source code of web server TIP, including example data.β20Updated 6 years ago
- Enrichment Networks for Pathway Enrichment Analysisβ63Updated 2 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Toolsβ39Updated last week
- β22Updated 2 years ago
- β47Updated 5 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing dataβ36Updated 2 years ago
- β17Updated 4 years ago
- β62Updated 2 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ceβ¦β31Updated 3 weeks ago
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plotsβ39Updated this week
- β30Updated 7 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq dataβ35Updated last month
- A R package for advanced single cell data vizβ68Updated 3 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq dataβ31Updated 3 years ago
- Calculating Tumor microenvironment scoreβ29Updated 2 years ago
- A robust and accurate cell type classifier for single cell RNA-seq dataβ17Updated 2 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".β18Updated 6 years ago
- Gene set enrichment analysis for single-cell RNAseq dataβ30Updated 2 years ago
- β19Updated 3 years ago
- Code repository for single cell RNA-seqβ39Updated 5 years ago
- β32Updated 4 years ago
- β48Updated 11 months ago
- β37Updated 3 years ago
- Code used to process the data of the HBCA projectβ32Updated last year
- R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters anβ¦β47Updated 3 years ago
- β10Updated 7 months ago
- SCassist : An AI Based Workflow Assistant for Single-Cell Analysisβ30Updated 4 months ago
- Dichotomous of innate immune landscapeβ17Updated 6 years ago
- Genetic Heterogeneity Profiling by Single Cell RNA Sequencingβ35Updated 5 years ago