junjunlab / bulkPseudotimeLinks
Pseudotime Analysis for Bulk Data
☆18Updated last year
Alternatives and similar repositories for bulkPseudotime
Users that are interested in bulkPseudotime are comparing it to the libraries listed below
Sorting:
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆35Updated 6 months ago
- The source code of web server TIP, including example data.☆20Updated 6 years ago
- ☆61Updated last year
- ☆32Updated 4 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Enrichment Networks for Pathway Enrichment Analysis☆62Updated 2 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆36Updated 2 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- SCassist : An AI Based Workflow Assistant for Single-Cell Analysis☆29Updated 3 months ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated 8 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆29Updated 3 years ago
- ☆22Updated 2 years ago
- ☆16Updated 4 years ago
- ☆37Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- ☆10Updated 6 months ago
- Code used to process the data of the HBCA project☆32Updated last year
- ☆30Updated 7 years ago
- Dichotomous of innate immune landscape☆17Updated 6 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆34Updated 3 weeks ago
- scWGCNA☆61Updated 3 years ago
- ☆47Updated 5 years ago
- ☆48Updated last year
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆31Updated last week
- A R package for advanced single cell data viz☆68Updated 3 months ago
- Hierarchical Cell Annotation☆26Updated last year
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆44Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year