wl13 / BioScriptsLinks
Scripts for bioinformatics data processing and analysis
☆12Updated 2 years ago
Alternatives and similar repositories for BioScripts
Users that are interested in BioScripts are comparing it to the libraries listed below
Sorting:
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13Updated last year
- RNAseq analysis with Hisat2, stringtie, and ballgown☆17Updated 6 years ago
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Updated 4 years ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Updated 2 years ago
- Tao Yan's Plot Toolkit☆12Updated 6 years ago
- RNA-seq analysis scripts☆15Updated 2 weeks ago
- Readme☆10Updated 5 years ago
- ☆23Updated last week
- ☆16Updated 2 years ago
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆17Updated last week
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 7 months ago
- a bucket of bioinformatics scripts☆13Updated last week
- All kinds of NGS analysis pipeline☆12Updated 6 years ago
- A series of scripts to automate sequence workflows☆19Updated 5 months ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 6 months ago
- https://filippob.github.io/introduction_to_gwas/☆21Updated 4 months ago
- GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation☆21Updated 3 years ago
- A python package for the identification of lncRNA from the assembled novel transcripts☆17Updated 4 years ago
- Direct RNA publication scripts☆11Updated 8 years ago
- shared scripts in Lu Lab @ Tsinghua University☆14Updated 7 years ago
- a set of NGS pipelines☆24Updated last month
- A complete Snakemake pipeline for detecting allele specific expression in RNA-seq☆10Updated 4 years ago
- ☆17Updated 2 years ago
- Instructions and helpful R code for Running GEMMA and GAPIT☆13Updated 8 years ago
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆14Updated 8 months ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Updated last year
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Updated 2 years ago
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆23Updated 2 years ago
- ☆11Updated 3 years ago
- Query the gene models of a given organism/assembly☆27Updated 3 weeks ago