Alternatives and similar repositories for BioScripts

Users that are interested in BioScripts are comparing it to the libraries listed below

• IBEXCluster / HPC-GVCW
  Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.
  ☆13Updated last year
• naumenko-sa / bioscripts
  a bucket of bioinformatics scripts
  ☆13Updated 3 weeks ago
• wen-chen / GCEN
  GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation
  ☆22Updated 3 years ago
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated 2 months ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 9 months ago
• LewisLabUCSD / NGS-Pipeline
  All kinds of NGS analysis pipeline
  ☆12Updated 6 years ago
• zhaoshuoxp / lncRNA
  De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk
  ☆10Updated 2 years ago
• RacconC / gtftools
  ☆16Updated 2 years ago
• nanoporetech / dRNA-paper-scripts
  Direct RNA publication scripts
  ☆11Updated 8 years ago
• bvilhjal / mixmogam
  Mixed Model Package For Genome-wide association mapping.
  ☆17Updated 6 years ago
• MorrellLAB / sequence_handling
  A series of scripts to automate sequence workflows
  ☆19Updated 7 months ago
• Baldridge37 / RNAseq_with_Hisat2_stringtie
  RNAseq analysis with Hisat2, stringtie, and ballgown
  ☆17Updated 6 years ago
• akiomiyao / tif
  Transposon Insertion Finder - Detection of new TE insertions in NGS data
  ☆20Updated 7 months ago
• WGLab / lncScore
  A python package for the identification of lncRNA from the assembled novel transcripts
  ☆17Updated 4 years ago
• imbforge / NGSpipe2go
  a set of NGS pipelines
  ☆24Updated last week
• ACAD-UofA / Guide-to-manipulating-PLINK-EIG-and-VCF-files
  A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…
  ☆23Updated 2 years ago
• Kingsford-Group / rnaseqtools
  toolkit to process gtf files
  ☆17Updated 4 years ago
• Shicheng-Guo / HowtoBook
  Readme
  ☆10Updated 5 years ago
• NYU-BFX / lncRNA-screen
  lncRNA-screen
  ☆25Updated 8 years ago
• raymondkiu / R-scripts-graphing-statistics
  My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq
  ☆12Updated 3 years ago
• boxiangliu / manhattan
  ggplot2-based Manhattan plot
  ☆12Updated 3 years ago
• filippob / introduction_to_gwas
  https://filippob.github.io/introduction_to_gwas/
  ☆22Updated 6 months ago
• dongwei1220 / R-Data-Visualization
  Data visualization with R
  ☆12Updated 5 years ago
• zhzheng92 / AG2PI_GWAS_workshop_June2021
  ☆13Updated 3 years ago
• caasivfbioinfo / Bol_pangenome
  ☆16Updated 2 years ago
• smped / ngsReports
  ☆23Updated 2 months ago
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆25Updated 3 years ago
• aryarm / as_analysis
  A complete Snakemake pipeline for detecting allele specific expression in RNA-seq
  ☆10Updated 4 years ago
• eacooper400 / GWAS_Pipelines
  Instructions and helpful R code for Running GEMMA and GAPIT
  ☆13Updated 8 years ago
• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated 7 months ago