An R package for estimating library complexity
☆13Sep 4, 2022Updated 3 years ago
Alternatives and similar repositories for preseqR
Users that are interested in preseqR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- VirHostMatcher: matching hosts of viruses based on oligonucleotide frequency (ONF) comparison☆31Jul 28, 2018Updated 7 years ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆94Dec 24, 2025Updated 3 months ago
- ☆18May 4, 2023Updated 2 years ago
- Riborex: Fast and flexible identification of differential translation from Ribo-seq data☆12Apr 9, 2021Updated 4 years ago
- Confirming specific taxonomic groups within your samples.☆19Dec 21, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆20Updated this week
- Tools for analyzing DNA methylation data☆44Feb 15, 2026Updated last month
- A short tutorial on using R + markdown☆19Sep 30, 2020Updated 5 years ago
- Single-channel blind source separation☆48Feb 5, 2018Updated 8 years ago
- phylogenetic networks using ggplot2 and ggtree☆13Dec 24, 2024Updated last year
- ALDEx_bioc is the working directory for updating bioconductor☆30May 1, 2025Updated 10 months ago
- large-memory key-value pair store for Python☆50May 26, 2013Updated 12 years ago
- Code for the ICML 2019 paper 'Conditioning by adaptive sampling for robust design'☆37Jun 4, 2021Updated 4 years ago
- Match up analysis and recommendation☆12Oct 17, 2019Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data☆137Apr 9, 2020Updated 5 years ago
- Training Conditional Random Fields (CRF) by Maximizing Area Under the ROC Curve (AUC)☆12Apr 12, 2019Updated 6 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆40Feb 14, 2026Updated last month
- Python package to plot sequence logos☆29Sep 21, 2023Updated 2 years ago
- bgzip support for Rust☆18Nov 16, 2023Updated 2 years ago
- 🔬 R package: Analysis of Large Affymetrix Microarray Data Sets☆12Dec 14, 2025Updated 3 months ago
- IMSEQ - IMmunogenetic SEQuence Analysis☆15Aug 10, 2018Updated 7 years ago
- Searching large collections of sequencing data with genome-scale queries☆17Feb 5, 2026Updated last month
- ☆15Jan 16, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Machine Learning Cliff Notes☆14Jun 2, 2019Updated 6 years ago
- Set of Tools to Analyse Bayesian Exponential Random Graph Models☆17Nov 27, 2025Updated 4 months ago
- Tool for ribo-seq analysis. Most of the functionality moved to ribotricer (https://github.com/smithlabcode/ribotricer)☆13Mar 5, 2021Updated 5 years ago
- Code and models for Molecule-Morphology Contrastive Pretraining (MoCoP)☆13Apr 12, 2024Updated last year
- A C++ library with zero code included☆16May 20, 2024Updated last year
- Software to trim the ITS region of FASTQ sequences for amplicon sequencing analysis☆17Mar 26, 2025Updated last year
- COCACOLA: a general framework for binning contigs in metagenomic studies incorporating read COverage, CorrelAtion, sequence COmposition a…☆17Mar 12, 2017Updated 9 years ago
- VirHostMatcher-Net: A network-based computational tool for predicting virus-host interactions.☆19Mar 8, 2026Updated 2 weeks ago
- Particle dynamics and simulated annealing for chromosome structure calculation☆28Mar 15, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- kClust is a fast and sensitive clustering method for the clustering of protein sequences. It is able to cluster large protein databases d…☆18Feb 12, 2019Updated 7 years ago
- Identifying viruses from metagenomic data by deep learning☆150Jun 1, 2025Updated 9 months ago
- Tools for processing UMI RNA-tag data☆131Mar 15, 2023Updated 3 years ago
- A basic implementation with GPy of an Automatic Bayesian Covariance Discovery (ABCD) system☆15Nov 15, 2023Updated 2 years ago
- ☆18Feb 12, 2019Updated 7 years ago
- A command palette for vim, akin to the ones found in Atom and Sublime Text.☆14Mar 5, 2016Updated 10 years ago
- Deep Learning Package in Python Based on The Deep Learning Tutorials and Theano☆23Oct 15, 2014Updated 11 years ago