A better, faster way to count guides in CRISPR screens.
☆35Apr 30, 2026Updated 5 months ago
Alternatives and similar repositories for guide-counter
Users that are interested in guide-counter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jan 19, 2019Updated 7 years ago
- An argument parsing library for Scala☆12May 19, 2026Updated 4 months ago
- Fast and Memory Efficient Genome Sketching via HyperLogLog, HyperMinHash, UltraLogLog and ExaLogLog☆22Updated this week
- ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.☆21Sep 1, 2021Updated 5 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Jun 6, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Java Bindings (JNI) for bwa☆22Dec 15, 2016Updated 9 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆15Mar 14, 2024Updated 2 years ago
- My computational biology course as it evolves in real time☆14Aug 31, 2021Updated 5 years ago
- Software for error-tolerant coding of information into DNA sequences using finite-state transducers.☆12Jan 8, 2017Updated 9 years ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated last year
- INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads☆17May 22, 2024Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆42Sep 24, 2026Updated 2 weeks ago
- Alignment-based gene expression quantification☆40Oct 1, 2026Updated last week
- 🐶 hlabud: HLA genotype analysis in R☆19Apr 11, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- bgzip support for Rust☆18Nov 16, 2023Updated 2 years ago
- Scaffolding with assembly likelihood optimization☆21Dec 14, 2020Updated 5 years ago
- ⚡️ 🧬 Fulgor is a fast and space-efficient colored de Bruijn graph index.☆59Sep 18, 2026Updated 3 weeks ago
- Filter of Pairwise Alignement☆45Jan 31, 2022Updated 4 years ago
- ☆22Mar 2, 2026Updated 7 months ago
- Fast interval intersection library☆45Oct 1, 2026Updated last week
- A flexible and fast sgRNA counter from FASTQ Files☆12Jun 17, 2026Updated 3 months ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Oct 31, 2019Updated 6 years ago
- Genomic neighbor typing of bacterial pathogens using MinHash☆42Jan 10, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Compacted and colored de Bruijn graph construction and querying☆100Oct 1, 2026Updated last week
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- ☆26Oct 15, 2020Updated 5 years ago
- ProphAsm – a rapid computation of simplitigs directly from k-mer sets☆25Feb 17, 2023Updated 3 years ago
- NEFF Calculator and MSA File Converter☆16May 6, 2026Updated 5 months ago
- ONEcode package to replace SAM/BAM, especially for eDNA mapping to everything☆20Aug 17, 2026Updated last month
- A Rust library providing fully dynamic sets of k-mers with high locality☆47May 13, 2026Updated 4 months ago
- GBZ file format for pangenome graphs☆46Sep 14, 2026Updated 3 weeks ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 9 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A library for GNU make to schedule rules as jobs with qsub or sbatch☆11Mar 7, 2013Updated 13 years ago
- Iterate k-min-mers from a DNA sequence in Rust☆13Apr 8, 2024Updated 2 years ago
- find likely coding segments in DNA using composition-normalised hexamer tables☆18Oct 18, 2024Updated last year
- Protobuf and gRPC specifications for the MinKNOW API☆73Jul 22, 2026Updated 2 months ago
- Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point f…☆11Dec 11, 2020Updated 5 years ago
- BAM/SAM/CRAM/FASTA reader, pileup engine, BCF/BAM writing☆29Updated this week
- 1-code framework: docs, C-library, and tools☆28Aug 14, 2026Updated last month