imjoy-team / imjoy-engineLinks
ImJoy Plugin Engine for running Python plugins locally or remotely from ImJoy.io
☆18Updated 3 years ago
Alternatives and similar repositories for imjoy-engine
Users that are interested in imjoy-engine are comparing it to the libraries listed below
Sorting:
- ☆33Updated 5 months ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 6 months ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆81Updated last week
- The RPC library used in ImJoy.☆25Updated last year
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- native Python dataclasses for the OME data model☆61Updated last week
- A napari plugin for zarr backed OME-NGFF images☆38Updated last week
- A 3D interactivity toolbox for napari☆37Updated 3 months ago
- GPU-accelerated Image Processing library for Python☆51Updated this week
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆87Updated this week
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆44Updated 5 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 5 months ago
- Python bindings for MMCore, Micro-Manager's device control layer☆35Updated 2 weeks ago
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 5 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆52Updated 5 months ago
- Easily read and write ome-tiff images in python☆28Updated last year
- Paint segmentations directly to on-disk/remote zarr arrays☆14Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 3 months ago
- General-purpouse camera capture plugin for data streaming to napari☆25Updated last year
- Optimize image processing workflows in napari☆18Updated 5 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆69Updated last week
- Python module for registering and fusing multi-view microscopy data☆23Updated 7 months ago
- A napari plugin for making animations☆90Updated 2 weeks ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆40Updated 3 weeks ago
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆52Updated 2 weeks ago
- ☆51Updated this week
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆24Updated 7 months ago
- ☆23Updated 4 years ago