imjoy-team / imjoy-engineLinks
ImJoy Plugin Engine for running Python plugins locally or remotely from ImJoy.io
☆18Updated 2 years ago
Alternatives and similar repositories for imjoy-engine
Users that are interested in imjoy-engine are comparing it to the libraries listed below
Sorting:
- ☆28Updated 3 months ago
- A napari plugin for zarr backed OME-NGFF images☆33Updated this week
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆80Updated last month
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆18Updated 2 weeks ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last month
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆34Updated 4 months ago
- The RPC library used in ImJoy.☆24Updated last year
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 3 weeks ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 3 months ago
- ☆12Updated 2 months ago
- Specification for the bioimage.io model description file.☆21Updated last week
- native Python dataclasses for the OME data model☆58Updated last month
- ☆22Updated 4 years ago
- A 3D interactivity toolbox for napari☆37Updated last month
- python tools for BigDataViewer☆22Updated 7 months ago
- Paint segmentations directly to on-disk/remote zarr arrays☆14Updated last year
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆17Updated last week
- Browse your OMERO database from within napari.☆38Updated this week
- Python module for registering and fusing multi-view microscopy data☆23Updated 5 months ago
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆46Updated last week
- MultiModal Big Image Data Sharing and Exploration☆16Updated 2 years ago
- Optimize image processing workflows in napari☆18Updated 3 months ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆23Updated 4 months ago
- ☆37Updated this week
- Running ImJoy plugins in Jupyter notebooks☆11Updated 2 years ago
- Python bindings for MMCore, Micro-Manager's device control layer☆35Updated last week
- GPU-accelerated Image Processing library for Python☆51Updated last month
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated last month
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆66Updated this week
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆16Updated 4 months ago