haesleinhuepf / napari-plot-profileView external linksLinks
☆20May 1, 2025Updated 9 months ago
Alternatives and similar repositories for napari-plot-profile
Users that are interested in napari-plot-profile are comparing it to the libraries listed below
Sorting:
- Linking napari layers with Matplotlib plots☆43Feb 2, 2026Updated last week
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- ☆13Jan 22, 2026Updated 3 weeks ago
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆22Aug 6, 2025Updated 6 months ago
- ☆22Jun 27, 2025Updated 7 months ago
- ☆16Jul 21, 2023Updated 2 years ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Jul 9, 2024Updated last year
- Napari plugin for vollseg☆14Jul 16, 2025Updated 6 months ago
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆16Nov 10, 2022Updated 3 years ago
- A napari plugin for clustering objects according to their properties.☆90Jan 26, 2026Updated 2 weeks ago
- Optimize image processing workflows in napari☆17May 1, 2025Updated 9 months ago
- Liquid handling robot for in situ serial multiplexing☆19Apr 7, 2017Updated 8 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Jul 18, 2025Updated 6 months ago
- Acquire bright field images along with the super resolution data and use it to track drift in 3D with nanometer precision!☆11Jun 22, 2023Updated 2 years ago
- A fully scalable robust image feature extraction library.☆28Updated this week
- Imagej toolset to ease hyperstacks visualization and handling☆23Updated this week
- A napari plugin to view and edit metadata☆13Feb 1, 2026Updated last week
- A napari Plugin for visualisaton of pixel values over time (t+ nD) as graphs.☆12Apr 24, 2024Updated last year
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30May 1, 2025Updated 9 months ago
- Cookiecutter for napari plugins☆71Nov 6, 2024Updated last year
- Analysis of TrackMate XML outputs in R☆17Jan 14, 2026Updated last month
- Command-line client for Fractal☆48Updated this week
- A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Rea…☆15Jun 22, 2024Updated last year
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- Open source SMLM microscope designs☆13May 31, 2023Updated 2 years ago
- ☆14Updated this week
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Updated this week
- some useful function to get Label from ROIs and vice versa , and more!☆11May 3, 2023Updated 2 years ago
- ☆51May 1, 2025Updated 9 months ago
- ☆14Jan 7, 2026Updated last month
- Python libraries for loading, running and packaging bioimage.io models☆35Feb 3, 2026Updated last week
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 7 months ago
- ☆33May 2, 2025Updated 9 months ago
- Particle tracking by solving linear assignment problem.☆62Updated this week
- Minimum Information about Tissue Imaging☆21Oct 18, 2023Updated 2 years ago
- A python script editor plugin for napari☆11Jul 8, 2023Updated 2 years ago
- ☆15Feb 5, 2025Updated last year
- Speed up coding/extending image analysis in Python.☆37Jan 20, 2026Updated 3 weeks ago
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆17Feb 6, 2026Updated last week