Python libraries for loading, running and packaging bioimage.io models
☆39Jul 8, 2026Updated last week
Alternatives and similar repositories for core-bioimage-io-python
Users that are interested in core-bioimage-io-python are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Specification for the bioimage.io model description file.☆23Jul 8, 2026Updated last week
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆23Nov 24, 2025Updated 7 months ago
- ngio is a Python library to streamline OME-Zarr image analysis workflows.☆50Jul 10, 2026Updated last week
- Website for the BioImage Model zoo -- a model zoo for bioimage analysis.☆59Jun 30, 2025Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- python tools for BigDataViewer☆23Jul 2, 2026Updated 2 weeks ago
- Resources for teaching/preparing to teach bioimage analysis☆63Updated this week
- GPU-accelerated general purpose image processing and image analysis in napari☆36May 1, 2025Updated last year
- StarDist plugin for napari☆40Aug 24, 2024Updated last year
- ☆39May 29, 2026Updated last month
- Transformer-based cell tracking for live-cell microscopy☆137Updated this week
- ☆24Jun 1, 2026Updated last month
- A napari plugin for zarr backed OME-NGFF images☆53Jul 13, 2026Updated last week
- Accelerated Pixel and Object Classifiers (APOC)☆62Apr 24, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆31May 12, 2026Updated 2 months ago
- Deep-learning library for image restoration.☆145Updated this week
- A napari plugin for clustering objects according to their properties.☆90Jul 13, 2026Updated last week
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- ☆15Feb 5, 2025Updated last year
- ☆11May 6, 2024Updated 2 years ago
- Easy Volumetric Segmentation with Deep Learning☆30Mar 30, 2026Updated 3 months ago
- ☆14Jun 4, 2023Updated 3 years ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Linking napari layers with Matplotlib plots☆45Jul 1, 2026Updated 2 weeks ago
- Process images using SimpleITK in napari☆23May 1, 2025Updated last year
- A python package for fitting splines.☆23Updated this week
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated 2 years ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆46May 1, 2025Updated last year
- Light microscopy simulation in python.☆54Jul 6, 2026Updated 2 weeks ago
- Minimum Information about Tissue Imaging☆21Oct 18, 2023Updated 2 years ago
- A dataset for loading zarr files to be used in machine learning training pipelines☆37Jan 5, 2026Updated 6 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Reference implementation of the Graph Exchange File Format☆41Updated this week
- Your Personal Assistant in Computational Bioimaging.☆47Mar 28, 2025Updated last year
- A self-supervised denoising algorithm.☆28Apr 6, 2024Updated 2 years ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆96Jul 7, 2026Updated last week
- Open source Python library for building bioimage analysis pipelines