Paint segmentations directly to on-disk/remote zarr arrays
☆16Mar 25, 2026Updated 4 months ago
Alternatives and similar repositories for zarpaint
Users that are interested in zarpaint are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A napari plugin to view and edit layer metadata☆13Aug 11, 2026Updated last week
- A fully scalable robust image feature extraction library.☆29Updated this week
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated 2 years ago
- dask empowered fast4dreg☆17Mar 11, 2026Updated 5 months ago
- Prototype implementation of napari-integrated CNN training viewer☆14Dec 27, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Modern Bio-Formats wrapper with clean lazy Python API☆23Jun 25, 2026Updated last month
- ☆14Jan 25, 2024Updated 2 years ago
- Speed up coding/extending image analysis in Python.☆37May 9, 2026Updated 3 months ago
- Generate multifunctional and macro recordable GUIs from Python classes☆47Aug 10, 2026Updated last week
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Jul 1, 2026Updated last month
- ☆23Mar 26, 2021Updated 5 years ago
- Napari gaming☆17Dec 22, 2021Updated 4 years ago
- ☆26Aug 6, 2026Updated last week
- Python image segmentation plugin☆31Jan 13, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Create web-based OME-Zarr galleries☆31Jul 7, 2026Updated last month
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated 3 weeks ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Jul 6, 2026Updated last month
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆23Aug 6, 2025Updated last year
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆19Apr 8, 2025Updated last year
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- Interface to the Bioformats Java library☆15Feb 17, 2026Updated 6 months ago
- Cookiecutter for napari plugins☆72Nov 6, 2024Updated last year
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Annotation of filaments and other curvilinear structures in 3D.☆12Oct 9, 2023Updated 2 years ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆26Oct 30, 2024Updated last year
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated last year
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆55Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated 7 months ago
- Particle tracking by solving linear assignment problem.☆67Jul 30, 2026Updated 2 weeks ago
- A stable diffusion demo for napari☆11Jun 7, 2026Updated 2 months ago
- Command-line client for Fractal☆49Aug 10, 2026Updated last week
- ☆15Jan 22, 2026Updated 6 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Tools for handling FIB-SEM data and annotations☆21Apr 4, 2025Updated last year
- widget for PSF simulation with aberrations☆26Oct 31, 2023Updated 2 years ago
- Documentation for napari (other than API docs)☆12Updated this week
- Utility functions for large-scale bio-image analysis.☆64Jul 1, 2026Updated last month
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated last year
- Napari training material for a workshop by the CZI funded initiatives LIBRE hub, Napari, and several amazing volunteers☆10Sep 28, 2023Updated 2 years ago
- ngio is a Python library to streamline OME-Zarr image analysis workflows.☆50Aug 11, 2026Updated last week