jni / zarpaintLinks
Paint segmentations directly to on-disk/remote zarr arrays
☆15Updated last year
Alternatives and similar repositories for zarpaint
Users that are interested in zarpaint are comparing it to the libraries listed below
Sorting:
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated this week
- A napari plugin to view and edit metadata☆12Updated last week
- python tools for BigDataViewer☆22Updated last year
- ☆33Updated 8 months ago
- Python module for registering and fusing multi-view microscopy data☆24Updated 10 months ago
- MultiModal Big Image Data Sharing and Exploration☆18Updated 2 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆20Updated 2 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 6 months ago
- A 3D interactivity toolbox for napari☆37Updated 6 months ago
- Napari gaming☆17Updated 4 years ago
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆55Updated this week
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆20Updated this week
- ☆13Updated 5 years ago
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆37Updated 3 weeks ago
- A plugin to read whole slide images within napari.☆21Updated last month
- A fully scalable robust image feature extraction library.☆28Updated 3 weeks ago
- Affinity based segmentation algorithms and tools☆10Updated 7 months ago
- ilastik plugin for napari☆14Updated 3 weeks ago
- A napari plugin for zarr backed OME-NGFF images☆42Updated 3 weeks ago
- Browse your OMERO database from within napari.☆40Updated this week
- 1d plotting in napari-based canvas.☆25Updated last week
- GPU-accelerated Image Processing library for Python☆52Updated this week
- Optimize image processing workflows in napari☆17Updated 8 months ago
- ☆49Updated last month
- ☆23Updated 4 years ago
- native Python dataclasses for the OME data model☆65Updated this week
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 8 months ago
- dask empowered fast4dreg☆15Updated last year
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆36Updated this week