bgruening / docker-galaxy-imaging

Related projects: ⓘ

• BMCV / galaxy-image-analysis
  Galaxy tools for image analysis
  ☆14Updated last month
• IDR / idr-notebooks
  Jupyter Notebooks for the Image Data Resource
  ☆18Updated last year
• IDR / idr-metadata
  Curated metadata for all studies published in the Image Data Resource
  ☆14Updated last week
• ome / omero-documentation
  Sphinx-based documentation for the Open Microscopy Environment
  ☆22Updated this week
• Novartis / Jenkins-LSCI
  Jenkins for Life Science Continuous Integration
  ☆12Updated 7 years ago
• CellProfiler / CellProfiler-plugins
  Community-contributed and experimental CellProfiler modules.
  ☆56Updated this week
• glencoesoftware / webinar-notebooks
  Jupyter notebooks from our OMERO Plus for High Content Screening & Analysis webinar
  ☆12Updated 10 months ago
• CellProfiler / stitching
  Image stitching
  ☆11Updated 5 years ago
• cytomining / cytominer
  Methods for Image-Based Cell Profiling
  ☆48Updated 4 months ago
• shntnu / cytomining-hackathon-wiki
  CytoData 2016 – origin story
  ☆17Updated 7 years ago
• FPvisualization / fpvisualization.github.io
  Visualization of fluorescent protein properties with d3.js. Obsolete.
  ☆12Updated 6 months ago
• jic-dtool / dtool
  Manage scientific data
  ☆16Updated 2 months ago
• ome / docker-example-omero
  OMERO Docker compose example
  ☆24Updated 7 months ago
• ome / ome-model
  OME model (specification, code generator, implementation)
  ☆13Updated 3 months ago
• HumanCellAtlas / metadata-schema
  This repo is for the metadata schemas associated with the HCA
  ☆64Updated this week
• ISA-tools / ISAcreator
  ISAcreator is a Java desktop application which allows for the creation and editing of ISA-Tab files. Originally developed by Eamonn Magui…
  ☆40Updated last year
• ncihtan / data-models
  Schema.org Data Models for HTAN
  ☆14Updated last week
• hadim / docker-omero
  Set of Dockerfile to build a ready-to-use OMERO server
  ☆15Updated 6 years ago
• CellMigStandOrg / biotracks
  A repository for data package representation for cell tracking data
  ☆12Updated 4 years ago
• bio-tools / biotoolsSchema
  biotoolsSchema : Tool description data model for computational tools in life sciences
  ☆36Updated 7 months ago
• ismms-himc / codex_dashboard
  Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
  ☆16Updated last year
• bioimage-io / bioimage-io-resources
  Model repository for bioimage.io
  ☆16Updated last year
• ome / omero-py
  Python project containing Ice remoting code for OMERO
  ☆20Updated this week
• mobie / mobie-viewer-fiji
  ☆30Updated this week
• mpicbg-scicomp / tissue_miner
  A toolkit to quantify cell dynamics in living tissues
  ☆11Updated 5 years ago
• intermine / intermine-ws-python-docs
  Tutorials for the InterMine Python web client
  ☆14Updated 2 years ago
• vitessce / vitessce-python
  Python API and Jupyter widget for Vitessce
  ☆37Updated this week
• MaayanLab / FAIRshake
  ☆10Updated 3 weeks ago
• ingewortel / celltrackR
  An R package for the analysis and interpretation of cell migration tracks.
  ☆13Updated 3 weeks ago
• ismms-himc / visium-clustergrammer2
  Spatial Transcriptomics Dashboard
  ☆28Updated last year