imjoy-team / imjoy-jupyter-extensionLinks
Running ImJoy plugins in Jupyter notebooks
☆11Updated 2 years ago
Alternatives and similar repositories for imjoy-jupyter-extension
Users that are interested in imjoy-jupyter-extension are comparing it to the libraries listed below
Sorting:
- The RPC library used in ImJoy.☆25Updated last year
- ☆23Updated 4 years ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 4 years ago
- Easily read and write ome-tiff images in python☆28Updated last year
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- Discover, install, and share napari plugins☆52Updated last week
- A 3D interactivity toolbox for napari☆37Updated 3 months ago
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- ilastik plugin for napari☆14Updated last month
- General-purpouse camera capture plugin for data streaming to napari☆25Updated last year
- Python module for registering and fusing multi-view microscopy data☆23Updated 7 months ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 6 months ago
- python tools for BigDataViewer☆22Updated 9 months ago
- Zarr filesystem backend for N5☆16Updated last month
- Experimental micro-service for implementing the Zarr spec over HTTP☆18Updated this week
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆28Updated 2 months ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 6 years ago
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆40Updated 2 weeks ago
- ☆23Updated 3 weeks ago
- ☆51Updated this week
- ☆12Updated 4 years ago
- The 4DN + BINA Tiered System of Microscopy Metadata Guidelines was developed by the 4DN Imaging Standards Working Group in collaboration …☆15Updated 2 years ago
- Collection of useful (to me) python scripts for interacting with napari☆11Updated 3 years ago
- Speed up coding/extending image analysis in Python.☆35Updated 3 weeks ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆81Updated this week
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆68Updated this week