Alternatives and similar repositories for llm_evaluation_for_gene_set_interpretation:

Users that are interested in llm_evaluation_for_gene_set_interpretation are comparing it to the libraries listed below

• Teichlab / celltypist_wiki
  Materials and scripts for building cell type encyclopedia table
  ☆19Updated 2 months ago
• oscar-franzen / PanglaoDB
  metadata and data from the database
  ☆39Updated 5 years ago
• OSU-BMBL / ssread
  A single-cell and spatial RNA-seq database for Alzheimer’s Disease
  ☆22Updated 8 months ago
• ailabstw / scDrug
  scDrug: From scRNA-seq to Drug Repositioning
  ☆30Updated last year
• ArcInstitute / SRAgent
  LLM agents for working with the SRA and associated bioinformatics databases.
  ☆52Updated this week
• QuKunLab / MultiomeBenchmarking
  ☆42Updated 3 weeks ago
• decomverse / ACTIONet
  ACTIONet single-cell analysis framework
  ☆38Updated 6 months ago
• suinleelab / contrastiveVI
  ☆53Updated 11 months ago
• Teichlab / drug2cell
  Gene group activity utility functions for Scanpy
  ☆71Updated 3 months ago
• DendrouLab / panpipes
  Multi-modal single cell analysis pipelines
  ☆57Updated this week
• wallet-maker / cytopus
  Single cell omics biology annotations
  ☆50Updated 3 weeks ago
• jlakkis / sciPENN
  ☆17Updated 2 years ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆52Updated 8 months ago
• cnio-bu / beyondcell
  Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …
  ☆49Updated 6 months ago
• lanagarmire / Single-cell-drug-repositioning
  ☆15Updated 8 months ago
• JinmiaoChenLab / ezSingleCell2
  ☆54Updated last year
• rahuldhodapkar / cell2sentence
  Create cell sentences from sequencing data
  ☆22Updated 7 months ago
• lanagarmire / Asgard
  ☆41Updated last year
• theislab / scArches-reproducibility
  Reproducing result from the paper
  ☆33Updated 3 years ago
• cellatlas / human
  ☆42Updated 5 months ago
• doraadong / UNIFAN
  Unsupervised cell functional annotation for single-cell RNA-Seq
  ☆22Updated 2 years ago
• Teichlab / cell2tcr
  Inference of TCR motifs
  ☆29Updated last week
• hukai916 / scATACpipe
  ☆27Updated 5 months ago
• epigen / CellWhisperer
  CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets
  ☆52Updated 5 months ago
• CostaLab / scMEGA
  scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference
  ☆38Updated 6 months ago
• ruppinlab / PERCEPTION
  Utilizing single-cell omics from patients tumor to predict response and resistance.
  ☆63Updated last year
• xleizi / easySCF
  ☆40Updated 3 months ago
• buenrostrolab / stimATAC_analyses_code
  All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs
  ☆40Updated 2 years ago
• KlugerLab / ALRA
  Imputation method for scRNA-seq based on low-rank approximation
  ☆74Updated last year
• theislab / scvelo_notebooks
  ☆34Updated 3 years ago