Alternatives and similar repositories for llm_evaluation_for_gene_set_interpretation:

Users that are interested in llm_evaluation_for_gene_set_interpretation are comparing it to the libraries listed below

• JinmiaoChenLab / ezSingleCell2
  ☆53Updated last year
• Teichlab / celltypist_wiki
  Materials and scripts for building cell type encyclopedia table
  ☆18Updated last month
• oscar-franzen / PanglaoDB
  metadata and data from the database
  ☆38Updated 5 years ago
• ruppinlab / PERCEPTION
  Utilizing single-cell omics from patients tumor to predict response and resistance.
  ☆63Updated last year
• Teichlab / cell2tcr
  Inference of TCR motifs
  ☆29Updated 3 weeks ago
• xleizi / easySCF
  ☆35Updated 2 months ago
• cellatlas / human
  ☆42Updated 3 months ago
• OSU-BMBL / ssread
  A single-cell and spatial RNA-seq database for Alzheimer’s Disease
  ☆22Updated 7 months ago
• cnio-bu / beyondcell
  Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …
  ☆48Updated 5 months ago
• netbiolab / scHumanNet
  Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3
  ☆39Updated 11 months ago
• DanHanh / scLinear
  ☆18Updated 7 months ago
• neurorestore / DE-analysis
  ☆37Updated 3 years ago
• alexyermanos / Platypus
  R package for the analysis of single-cell immune repertoires
  ☆42Updated 2 weeks ago
• showteeth / scfetch
  Access and Format Single-cell RNA-seq Datasets from Public Resources
  ☆35Updated 2 months ago
• wallet-maker / cytopus
  Single cell omics biology annotations
  ☆49Updated 3 weeks ago
• kaizhang / single-cell-benchmark
  ☆10Updated last year
• jishnu-lab / SLIDE
  ☆26Updated this week
• CostaLab / scMEGA
  scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference
  ☆38Updated 5 months ago
• angelettilab / scMouseBcellFlu
  ☆18Updated 3 years ago
• BorchLab / Ibex
  Using BCR and expression for sequence embedding
  ☆19Updated this week
• Teichlab / drug2cell
  Gene group activity utility functions for Scanpy
  ☆67Updated 2 months ago
• forrest-lab / NATMI
  NATMI: Network Analysis Toolkit for the Multicellular Interactions
  ☆35Updated 3 years ago
• Teichlab / limbcellatlas
  This repository contains codes used for the human fetal limb cell atlas.
  ☆13Updated 3 weeks ago
• epigen / CellWhisperer
  CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets
  ☆50Updated 4 months ago
• aertslab / GENIE3
  GENIE3 (GEne Network Inference with Ensemble of trees) R-package
  ☆30Updated 2 years ago
• omnideconv / spacedeconv
  A unified interface to spatial transcriptomics deconvolution tools
  ☆40Updated this week
• RMolania / TCGA_PanCancer_UnwantedVariation
  ☆47Updated last year
• arpatil01 / scViewer
  ☆9Updated last year
• sacanlab / immunotar
  ☆13Updated 4 months ago
• PFPrzytycki / CellWalkR
  CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements
  ☆10Updated 3 months ago