idekerlab / llm_evaluation_for_gene_set_interpretationLinks
Code space for 'Evaluation of large language models for discovery of gene set function'
☆40Updated 10 months ago
Alternatives and similar repositories for llm_evaluation_for_gene_set_interpretation
Users that are interested in llm_evaluation_for_gene_set_interpretation are comparing it to the libraries listed below
Sorting:
- Materials and scripts for building cell type encyclopedia table☆20Updated 2 weeks ago
- Supporting data files and code for the publication by Shilts et al.☆31Updated 3 years ago
- ☆16Updated last year
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆26Updated last year
- ☆50Updated 7 months ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- ☆29Updated 4 months ago
- metadata and data from the database☆41Updated 5 years ago
- ☆17Updated last year
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆57Updated last year
- scDrug: From scRNA-seq to Drug Repositioning☆36Updated 2 years ago
- ACTIONet single-cell analysis framework☆42Updated last year
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆71Updated 2 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Updated last year
- ☆61Updated last year
- ☆44Updated 3 years ago
- repository containing analysis scripts and auxiliary files☆36Updated 5 years ago
- ☆20Updated 2 weeks ago
- ☆26Updated 5 months ago
- The code for gene set analysis by accessing domain databases☆81Updated last month
- An R package for single-cell CRISPR screen data analysis emphasizing statistical rigor, massive scalability, and ease of use.☆34Updated last month
- ☆18Updated 3 years ago
- Using BCR and expression for sequence embedding☆25Updated last week
- Fast motif matching in R☆46Updated last year
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆62Updated 5 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated last month
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Updated last year
- ☆56Updated last year
- ☆15Updated 2 years ago
- Identify cell type based on cell markers for single cell squencing☆11Updated last year