Alternatives and similar repositories for scDrug

Users that are interested in scDrug are comparing it to the libraries listed below

• lanagarmire / Asgard
  ☆43Updated last year
• Teichlab / celltypist_wiki
  Materials and scripts for building cell type encyclopedia table
  ☆19Updated 5 months ago
• Roy-lab / scMTNI
  ☆27Updated last week
• lanagarmire / Single-cell-drug-repositioning
  ☆16Updated 11 months ago
• SmritiChawla / Precily
  ☆31Updated 2 years ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆54Updated 11 months ago
• Teichlab / drug2cell
  Gene group activity utility functions for Scanpy
  ☆79Updated 6 months ago
• ZJUFanLab / scRank
  A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…
  ☆49Updated 3 weeks ago
• ZJUFanLab / scSpace
  an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…
  ☆23Updated 2 years ago
• CSB5 / CaDRReS-Sc
  CaDRReS-Sc is a framework for analyzing drug response heterogeneity based on single-cell RNA-seq data
  ☆17Updated 3 years ago
• cailab-tamu / scTenifoldNet
  A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data
  ☆23Updated 5 months ago
• cnio-bu / beyondcell
  Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …
  ☆52Updated 9 months ago
• bm2-lab / STAMP
  ☆10Updated last month
• czi-ai / scGenePT
  ☆16Updated 5 months ago
• yjgeno / GenKI
  ☆15Updated last year
• QuKunLab / MultiomeBenchmarking
  ☆47Updated 3 months ago
• ImmucanWP7 / immucan-scdb
  ☆16Updated last year
• YDaiLab / scRegulate
  Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data
  ☆12Updated last month
• TencentAILabHealthcare / scTranslator
  ☆36Updated 3 weeks ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆38Updated 2 years ago
• xiaoyeye / TFvelo
  ☆45Updated last year
• decomverse / ACTIONet
  ACTIONet single-cell analysis framework
  ☆42Updated 9 months ago
• XLearning-SCU / MetaQ
  Code for the paper "MetaQ: fast, scalable and accurate metacell inference via deep single-cell quantization"
  ☆11Updated 6 months ago
• jlakkis / sciPENN
  ☆18Updated 2 years ago
• JiangBioLab / DeepCCI
  ☆21Updated 2 years ago
• SchubertLab / mvTCR
  ☆53Updated 7 months ago
• MedicalGenomicsLab / deconvolution_benchmarking
  ☆21Updated last year
• getzlab / CPTAC_PanCan_PTM_2023
  ☆17Updated last year
• yuanzhiyuan / SODB_analysis
  ☆12Updated 2 years ago
• netbiolab / scHumanNet
  Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3
  ☆43Updated 3 weeks ago