Alternatives and similar repositories for scDrug

Users that are interested in scDrug are comparing it to the libraries listed below

• lanagarmire / Asgard
  ☆43Updated last year
• Roy-lab / scMTNI
  ☆27Updated last week
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆54Updated 11 months ago
• Teichlab / celltypist_wiki
  Materials and scripts for building cell type encyclopedia table
  ☆19Updated 6 months ago
• lanagarmire / Single-cell-drug-repositioning
  ☆16Updated last year
• QuKunLab / MultiomeBenchmarking
  ☆49Updated 4 months ago
• Teichlab / drug2cell
  Gene group activity utility functions for Scanpy
  ☆79Updated 6 months ago
• SmritiChawla / Precily
  ☆31Updated 2 years ago
• decomverse / ACTIONet
  ACTIONet single-cell analysis framework
  ☆42Updated 10 months ago
• datapplab / AutoClass
  ☆44Updated 3 years ago
• ZJUFanLab / scSpace
  an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…
  ☆23Updated 2 years ago
• jlakkis / sciPENN
  ☆18Updated 2 years ago
• SchubertLab / mvTCR
  ☆53Updated 8 months ago
• madilabcode / scNET
  ☆45Updated last week
• ZJUFanLab / scRank
  A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…
  ☆50Updated last month
• xiaoyeye / TFvelo
  ☆45Updated last year
• mcgilldinglab / CellAgentChat
  Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data
  ☆31Updated 3 months ago
• ImmucanWP7 / immucan-scdb
  ☆16Updated last year
• theislab / scTab
  ☆59Updated 10 months ago
• cailab-tamu / scTenifoldNet
  A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data
  ☆23Updated 6 months ago
• mcgilldinglab / UNAGI
  Unagi: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases.
  ☆23Updated 3 weeks ago
• settylab / Mellon
  Non-parametric density inference for single-cell analysis.
  ☆72Updated last month
• GuangyuWangLab2021 / cellDancer
  Predict RNA velocity through deep learning
  ☆70Updated last year
• saezlab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆88Updated last year
• TencentAILabHealthcare / scTranslator
  ☆36Updated last month
• broadinstitute / Celligner_ms
  Code related to the Celligner manuscript
  ☆46Updated 4 years ago
• yjgeno / GenKI
  ☆15Updated last year
• CostaLab / scMEGA
  scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference
  ☆40Updated 9 months ago
• ruppinlab / PERCEPTION
  Utilizing single-cell omics from patients tumor to predict response and resistance.
  ☆70Updated 2 years ago
• cnio-bu / beyondcell
  Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …
  ☆52Updated 10 months ago