ailabstw / scDrug
scDrug: From scRNA-seq to Drug Repositioning
☆33Updated 2 years ago
Alternatives and similar repositories for scDrug
Users that are interested in scDrug are comparing it to the libraries listed below
Sorting:
- ☆42Updated last year
- ☆16Updated 10 months ago
- an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…☆22Updated last year
- Gene group activity utility functions for Scanpy☆74Updated 4 months ago
- ☆26Updated 4 months ago
- ☆15Updated last year
- ☆43Updated last year
- Materials and scripts for building cell type encyclopedia table☆19Updated 4 months ago
- ☆30Updated 2 years ago
- ☆51Updated 6 months ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆53Updated 9 months ago
- ☆44Updated 2 months ago
- ☆36Updated 9 months ago
- Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets☆37Updated last year
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆38Updated 7 months ago
- ☆11Updated 6 months ago
- ACTIONet single-cell analysis framework☆39Updated 8 months ago
- ☆16Updated last year
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆42Updated last year
- ☆17Updated 2 years ago
- ☆21Updated 2 years ago
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆47Updated 9 months ago
- A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data☆16Updated 5 years ago
- A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data☆23Updated 4 months ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆51Updated 2 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…☆11Updated 2 months ago
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆45Updated 4 months ago
- Bayesian model for RNA velocity estimation of periodic manifolds☆33Updated 10 months ago
- ☆40Updated 5 months ago