cole-trapnell-lab / sci-plexLinks
repository containing analysis scripts and auxiliary files
☆36Updated 5 years ago
Alternatives and similar repositories for sci-plex
Users that are interested in sci-plex are comparing it to the libraries listed below
Sorting:
- ☆65Updated last month
- ACTIONet single-cell analysis framework☆44Updated last year
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆53Updated 3 years ago
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆65Updated 5 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆64Updated last year
- ☆31Updated 5 years ago
- ☆61Updated last year
- Knowledge-primed neural networks☆38Updated 2 years ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆46Updated 2 years ago
- cTPnet Package☆27Updated 3 years ago
- An accurate and efficient deep learning method for single-cell RNA-seq data imputation☆89Updated 3 years ago
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 3 years ago
- ☆19Updated 4 years ago
- Generative adversarial networks for single-cell RNA-seq imputation☆39Updated 5 years ago
- ☆43Updated 3 years ago
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated 2 years ago
- flexible CDR based distance metrics☆69Updated 3 weeks ago
- CMap Notebooks for LINCS 2020 Workshop☆48Updated 4 years ago
- Diffusion model for gene regulatory network inference.☆23Updated 4 months ago
- Python package to load and query ARCHS4 data☆24Updated 4 months ago
- ☆56Updated last year
- Deep Learning Method to Identify Cancer Associated TCRs☆47Updated 3 years ago
- ☆44Updated last year
- ☆62Updated 3 months ago
- ☆62Updated 4 months ago
- Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network☆106Updated 2 years ago
- Additional code and analysis from the single-cell integration benchmarking project☆69Updated 2 years ago
- ☆50Updated 9 months ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆51Updated 3 months ago
- Tools for sgRNA calling in direct capture Perturb-seq data☆39Updated 2 years ago