R functions related to pedigrees
☆14Sep 29, 2025Updated 5 months ago
Alternatives and similar repositories for pedigreeTools
Users that are interested in pedigreeTools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Documentation for the Helium pedigree visualization software☆17Apr 3, 2024Updated last year
- Next Generation Genomic Prediction Tools☆10Mar 13, 2026Updated 2 weeks ago
- Stochastic-Lanczos-Expedited Mixed Models☆10Dec 10, 2025Updated 3 months ago
- PedigreeSim is software that generates simulated genetic marker data of individuals in pedigreed populations. A population can consist of…☆14Apr 13, 2021Updated 4 years ago
- ☆27Mar 13, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Multivariate Gaussian Models for Genomic and Pedigree Data☆14May 23, 2020Updated 5 years ago
- ☆114Oct 3, 2025Updated 5 months ago
- R package for breeding program simulations☆64Mar 2, 2026Updated 3 weeks ago
- lme4 for Genomic Selection☆18Jan 26, 2026Updated 2 months ago
- Repository☆10Oct 23, 2024Updated last year
- Practical Deep Learning for Genomic Prediction: A Keras based guide to implement deep learning☆71Jul 6, 2023Updated 2 years ago
- Pedigree creation, plotting, and analytics☆17Jun 1, 2024Updated last year
- R packages for pedigree analysis☆16Feb 10, 2026Updated last month
- A tool to implement Genomic Prediction Experiments using Deep Learning☆17Mar 24, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Calculates the probability of a haplotype given a population reference panel☆12Dec 9, 2024Updated last year
- Julia for Whole-genome Analysis Software☆104Updated this week
- ☆14Feb 16, 2026Updated last month
- An efficient tool for cross-population fixation index estimation on variant call format files☆11Mar 1, 2026Updated 3 weeks ago
- A set of tutorials for msprime and tskit.☆21Mar 11, 2026Updated 2 weeks ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆32Mar 8, 2025Updated last year
- R front-end for TASSEL 5☆33Mar 17, 2026Updated last week
- Biol 4800: a course on reproducible research using R and some other fun bits, taught by Tad Dallas at Louisiana State University.☆21Dec 12, 2020Updated 5 years ago
- ☆22May 18, 2017Updated 8 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Modular Breeding Program Simulator☆45Feb 19, 2026Updated last month
- R package that constructs (non)additive genetic relationship matrices, and their inverses, from a pedigree to be used in linear mixed eff…☆23Sep 4, 2024Updated last year
- ☆10Nov 4, 2021Updated 4 years ago
- Python Breeding Optimizer and Simulator: A Python library for simulating and optimizing breeding pipelines.☆11Dec 10, 2024Updated last year
- ☆10Sep 4, 2025Updated 6 months ago
- Software to call ROHs☆18Oct 15, 2025Updated 5 months ago
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆57Sep 6, 2025Updated 6 months ago
- R devel with ASAN / UBSAN sanitizers☆11Updated this week
- quickLD, a large-scale, long-range Linkage Disequilibrium analysis tool utilizing parallel CPU, GPU or heterogeneous computing.☆10Jun 10, 2022Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Functional Data Analysis using Square-Root Slope Framework☆14Feb 20, 2026Updated last month
- Added functions for Echidna in R☆11Apr 14, 2023Updated 2 years ago
- Using genome-wide markers for polyploid breeding☆12Updated this week
- Create .mzML files through the R Console☆12Aug 27, 2025Updated 6 months ago
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆12Aug 8, 2025Updated 7 months ago
- Tools for working with pedigrees in R☆28Feb 1, 2026Updated last month
- trans-species prediction of TFBS in plants☆14Apr 26, 2021Updated 4 years ago