halasadi / MAPSLinks
software for the MAPS method
☆24Updated 6 years ago
Alternatives and similar repositories for MAPS
Users that are interested in MAPS are comparing it to the libraries listed below
Sorting:
- A package for population structure inference from RAD-seq data☆34Updated 4 years ago
- ☆31Updated 2 years ago
- Methods for examining PCA locally along the genome.☆86Updated last year
- ☆30Updated 3 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- Infer demographic history with the Moran model☆49Updated 5 months ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆56Updated 5 months ago
- Detecting natural selection from population-based genetic data☆28Updated 6 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 6 years ago
- Estimate recombination rates from population genetic data☆69Updated 5 years ago
- Tools for inference of the DFE with dadi☆14Updated 4 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆68Updated last month
- ☆13Updated 4 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 7 years ago
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Tools and Utilities for msmc and msmc2☆49Updated 3 months ago
- Graph-aware Retrieval of Selective Sweeps☆22Updated last year
- ☆44Updated 8 months ago
- Collection of Python scripts for parsing/analyses of RAD-seq data☆23Updated 8 months ago
- method for modeling continuous and discrete population genetic structure☆37Updated last year
- Population assignment analysis using R☆16Updated 4 months ago
- predicting DFE and alpha from polymorphism data☆28Updated 7 years ago
- A statistical framework for ploidy estimation using NGS short-read data☆62Updated 7 years ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆27Updated 7 years ago
- Efficient program for calculating Extended Haplotype Homozygosity (EHH) and Integrated Haplotype Score (iHS)☆45Updated 6 years ago
- A statistical framework for reference-free inference of archaic local ancestry☆16Updated 6 years ago
- Repository for speciation genomics website☆27Updated 3 months ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Tutorial on using popular tools for learning about population history☆52Updated 7 years ago