software for the MAPS method
☆25Mar 20, 2019Updated 7 years ago
Alternatives and similar repositories for MAPS
Users that are interested in MAPS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Estimating Effective Migration Surfaces☆112Oct 28, 2023Updated 2 years ago
- method for modeling continuous and discrete population genetic structure☆39May 2, 2026Updated 2 months ago
- Rescale genetic polymorphism data to match a common sample size.☆16Nov 4, 2021Updated 4 years ago
- Work for the tree sequence inference paper.☆23Oct 19, 2020Updated 5 years ago
- Code to do data processing and create figures for "The geography of recent genetic ancestry across Europe", http://arxiv.org/abs/1207.381…☆15May 26, 2014Updated 12 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A package for population structure inference from RAD-seq data☆36May 14, 2021Updated 5 years ago
- ☆11Jun 26, 2020Updated 6 years ago
- starmie: plotting and inference for population structure models☆15Sep 20, 2018Updated 7 years ago
- ☆16Jun 14, 2017Updated 9 years ago
- Automatically exported from code.google.com/p/macs☆17Oct 17, 2019Updated 6 years ago
- Selection outlier scan with population branch statistic☆15Feb 21, 2024Updated 2 years ago
- ☆12Mar 11, 2025Updated last year
- An R package to help in plotting PCA results nicely.☆12Jan 16, 2020Updated 6 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Aug 8, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Module for analysing admixture graphs☆29Apr 30, 2018Updated 8 years ago
- Simulating Plasmodium Epidemiological and Genetic Data☆12Apr 3, 2023Updated 3 years ago
- Methods for examining PCA locally along the genome.☆89Aug 13, 2024Updated last year
- predicting DFE and alpha from polymorphism data☆29Oct 4, 2018Updated 7 years ago
- Provides helper scripts for inferring local ancestry, performing ancestry-specific PCA, etc☆117Sep 13, 2021Updated 4 years ago
- Tools test whether admixture occurred and more☆232Jul 13, 2026Updated last week
- Utilities for analyzing next generation sequencing data.☆16May 7, 2021Updated 5 years ago
- ☆32Jan 5, 2023Updated 3 years ago
- deep learning prediction of geographic location from individual genome sequences☆54Jan 20, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Analysis scripts from the paper "Eight thousand years of natural selection in Europe".☆11Nov 19, 2015Updated 10 years ago
- Haplotype based scans for selection☆149Jun 5, 2026Updated last month
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Mar 19, 2026Updated 4 months ago
- AncestralPaths is a local ancestry painting technique based on genealogies produced by RELATE. The method aims to assign 'path' ancestrie…☆11Jun 29, 2023Updated 3 years ago
- An automated workflow for processing ddRADseq data using Stacks v2.4. Starts with sequencer files, and ends with various input files for …☆10Apr 25, 2024Updated 2 years ago
- Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.☆12Aug 25, 2024Updated last year
- FastSMC is a method to quickly and accurately estimate pairwise identical-by-descent (IBD) regions in the genome. FastSMC estimates the a…☆15Sep 2, 2021Updated 4 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆31Sep 27, 2019Updated 6 years ago
- Ancestry and Kinship Tools☆70Apr 20, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- tabix file access with golang using biogo machinery☆10Jul 1, 2025Updated last year
- BITE: BioInformatics tools for everyone☆22Jul 25, 2024Updated last year
- Time-stratified f-statistics☆17Aug 1, 2025Updated 11 months ago
- Estimation of per-individual inbreeding tracts under a probabilistic framework☆16Aug 11, 2023Updated 2 years ago
- a simple C++ library for parsing and manipulating VCF files, + many command-line utilities☆20Mar 22, 2017Updated 9 years ago
- The flare program performs local ancestry inference☆49Nov 4, 2025Updated 8 months ago
- A pipeline that accepts a VCF file to run through Admixture☆65May 3, 2026Updated 2 months ago