halasadi / MAPSLinks
software for the MAPS method
☆24Updated 6 years ago
Alternatives and similar repositories for MAPS
Users that are interested in MAPS are comparing it to the libraries listed below
Sorting:
- A package for population structure inference from RAD-seq data☆34Updated 4 years ago
- ☆31Updated 2 years ago
- Methods for examining PCA locally along the genome.☆83Updated last year
- Infer demographic history with the Moran model☆48Updated 4 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆63Updated 11 months ago
- ☆30Updated 3 years ago
- Collection of Python scripts for parsing/analyses of RAD-seq data☆23Updated 7 months ago
- Repository for speciation genomics website☆26Updated last month
- ☆44Updated 6 months ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 7 years ago
- Detecting natural selection from population-based genetic data☆28Updated 6 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Pinpoints the mutation favored by selection☆34Updated 3 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆53Updated 3 months ago
- Tools and Utilities for msmc and msmc2☆48Updated 2 months ago
- predicting DFE and alpha from polymorphism data☆27Updated 7 years ago
- A pipeline that accepts a VCF file to run through Admixture☆62Updated 9 months ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆27Updated 7 years ago
- Tools for inference of the DFE with dadi☆14Updated 4 years ago
- Interim data for the Darwin Tree of Life Project☆33Updated 5 years ago
- Efficient program for calculating Extended Haplotype Homozygosity (EHH) and Integrated Haplotype Score (iHS)☆45Updated 5 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 7 years ago
- Tutorial on using popular tools for learning about population history☆51Updated 7 years ago
- Estimate recombination rates from population genetic data☆68Updated 5 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆26Updated 6 years ago
- Sampling and inference of genealogies with recombination☆43Updated 3 months ago