hewm2008 / BamDeal
BamDeal: a comprehensive toolkit for bam manipulation
☆14Updated 2 years ago
Alternatives and similar repositories for BamDeal:
Users that are interested in BamDeal are comparing it to the libraries listed below
- Codes for the lettuce resequencing project in 2020☆30Updated 3 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆43Updated last year
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- A pipeline for isoseq☆23Updated 6 years ago
- A tool for performing collinearity-incorporating homology inference☆31Updated last year
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆54Updated last week
- ☆24Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆32Updated last week
- Pan-genome Construction and Population Structure Variation Calling pipeline☆38Updated 7 months ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- Some bioinformic domestic scripts.☆34Updated 2 years ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆41Updated last month
- Computational Analysis of Gene Expression Evolution☆40Updated 3 weeks ago
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆17Updated last year
- Easily construct the ML species tree with single-copy gene shared by different species.☆26Updated 6 years ago
- Plant genome assembly and annotation pipeline using snakemake☆44Updated last year
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆35Updated 2 years ago
- Scripts to convert between file formats for various analyses☆16Updated 2 months ago
- ☆27Updated 4 months ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- ☆21Updated 5 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆27Updated last month
- perSVade: personalized Structural Variation detection☆39Updated 2 months ago
- methods for orphan gene prediction paper optimization☆25Updated 3 years ago
- This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.☆45Updated 2 years ago
- GO KEGG annotation☆34Updated 2 years ago
- zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.☆29Updated 3 weeks ago
- Bulked-Segregant Analysis using vcf file with or without parents☆25Updated 4 months ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆29Updated last year