wouterpeyrot / CCGWASLinks
☆19Updated 2 years ago
Alternatives and similar repositories for CCGWAS
Users that are interested in CCGWAS are comparing it to the libraries listed below
Sorting:
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆19Updated 2 weeks ago
- A collection of various utilities for GWAS summary statistics☆27Updated last year
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- ☆16Updated 4 months ago
- The gsmr R-package implements the GSMR (Generalised Summary-data-based Mendelian Randomisation) method that uses GWAS summary statistics …☆17Updated last year
- ☆33Updated 2 years ago
- ☆19Updated last year
- Leveraging functional information to improve GWAS summary statistic imputation☆20Updated 3 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆27Updated last week
- Regional association plots☆25Updated last year
- ☆24Updated 4 years ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- Regional association plots☆26Updated last year
- Primo☆16Updated 3 years ago
- PRS pipeline using PRS_CS☆14Updated 3 weeks ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 9 months ago
- Software to infer latent pleiotropic components from GWAS summary data☆15Updated 4 months ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆32Updated last year
- ☆21Updated 2 months ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆29Updated 3 weeks ago
- ☆27Updated 3 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 2 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 3 months ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- ☆11Updated 3 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆20Updated 4 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- Code for implementing Mendelian randomization investigations☆17Updated 9 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆29Updated last year