Serves a web interface and RESTful API for reference genome assets.
☆12Feb 13, 2026Updated 2 weeks ago
Alternatives and similar repositories for refgenieserver
Users that are interested in refgenieserver are comparing it to the libraries listed below
Sorting:
- Manager for multi-container computing environments☆26Updated this week
- Annotating epigenetic variation among samples with region sets in R☆11Jan 18, 2025Updated last year
- A modular, containerized pipeline for PRO-seq data processing☆11Updated this week
- Reference genome resource manager☆74Updated this week
- R package for Methylation-based Inference of Regulatory Activity☆13Apr 9, 2020Updated 5 years ago
- An interactive Shiny web application for genomic interval enrichment analysis using LOLA.☆16Apr 17, 2022Updated 3 years ago
- A command line application for downloading scientific papers.☆20Oct 29, 2025Updated 4 months ago
- ☆19Jan 24, 2025Updated last year
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆19Apr 27, 2025Updated 10 months ago
- Bedfile perturbation tool☆17Sep 29, 2025Updated 5 months ago
- MicrobeDirectory 2.0☆22Aug 10, 2020Updated 5 years ago
- Modular job submitter for arbitrary pipelines or commands.☆24Updated this week
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Aug 9, 2025Updated 6 months ago
- a simple read-only sequence database, designed for short reads☆20Dec 19, 2016Updated 9 years ago
- ☆16Dec 6, 2025Updated 2 months ago
- Augmented interval list (AIList): a novel data structure for efficient genomic interval search☆23Aug 29, 2022Updated 3 years ago
- Calculate and plot distributions of genomic ranges☆27Apr 23, 2025Updated 10 months ago
- Catalog of genomic indexes freely available from public clouds☆68Jan 24, 2026Updated last month
- Simplified R caching for reproducible big data projects☆33Updated this week
- GC Skew Test for Bacterial Genomes☆32Sep 29, 2022Updated 3 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Jun 16, 2024Updated last year
- MiGA: Microbial Genomes Atlas☆32Feb 10, 2026Updated 3 weeks ago
- A CUDA Library for Parallel n-body Integrations with focus on Simulations☆17Jul 2, 2014Updated 11 years ago
- An example GenBank file reader in Rust☆36Jun 8, 2021Updated 4 years ago
- Segmentation-free Analysis of In Situ Capture data☆13Jan 5, 2026Updated last month
- This project contains simple methods to measure sample relatedness and identify potential swaps and contamination☆10Jan 8, 2016Updated 10 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 2 years ago
- ANPELA is a user-centric and application-oriented tool which is capable of navigating the data processing for single-cell proteomics (SCP…☆14Aug 12, 2025Updated 6 months ago
- Repository with materials for the Speeding Up Science Workshops at UC Davis☆10Oct 31, 2019Updated 6 years ago
- TAXnomic Profile Aggregation and STAndardisation☆42Nov 18, 2025Updated 3 months ago
- Provide access to PostgreSQL's sequences☆10Oct 25, 2024Updated last year
- Software for the 2015 Waterloo iGEM Team☆11Oct 19, 2015Updated 10 years ago
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Mar 11, 2024Updated last year
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Interactive Python development in Neovim with cell-based execution, IPython kernels, and rich media output in your browser☆22Dec 9, 2025Updated 2 months ago
- Bioconductor R-package: Curated Prostate Cancer Data☆11Oct 1, 2024Updated last year
- Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 2…☆10Jan 12, 2019Updated 7 years ago
- Multiple Bacteria Genome Compressor (MBGC)☆11Feb 20, 2026Updated last week
- ☆14Mar 28, 2025Updated 11 months ago