Philyzh8 / scMGCA
"Topological Identification and Interpretation for Single-cell Gene Regulation Elucidation across Multiple Platforms using scMGCA" in Nature Communications 2023
☆11Updated last year
Related projects ⓘ
Alternatives and complementary repositories for scMGCA
- ☆17Updated 2 years ago
- ☆14Updated 4 months ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆21Updated 3 weeks ago
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated last year
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆22Updated 3 years ago
- ☆28Updated 2 months ago
- Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…☆19Updated this week
- ☆29Updated 10 months ago
- Cell Annotation using Machine Learning-based method for the presence of Unknown cells (CAMLU)☆11Updated last year
- ☆19Updated 3 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆29Updated 2 years ago
- An unsupervised scRNA-seq analysis workflow with graph attention networks☆24Updated last year
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆37Updated 2 months ago
- Simultaneous deep generative modeling and clustering of single cell genomic data☆29Updated 2 years ago
- ☆11Updated 11 months ago
- Materials and scripts for building cell type encyclopedia table☆15Updated 2 months ago
- Marker Selection by matching manifolds and elastic net☆23Updated last month
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆34Updated 2 years ago
- Scripts for data and figure generation in SAVER paper☆17Updated 3 years ago
- Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq d…☆18Updated 2 years ago
- ☆10Updated last year
- ☆36Updated last year
- a variational autoencoder method for clustering single-cell mutation data☆9Updated 7 months ago
- Chromatin interaction aware gene regulatory modeling with graph attention networks☆19Updated last year
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆11Updated last year
- SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data☆16Updated 3 years ago
- Code, data and analysis for moslin.☆11Updated last month
- R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …☆19Updated last year
- ☆26Updated 10 months ago
- scLearn:Learning for single cell assignment☆34Updated last year