guilherme-pereira / QTLpoly
R package for random-effect multiple QTL mapping in autopolyploids
☆9Updated 3 years ago
Alternatives and similar repositories for QTLpoly:
Users that are interested in QTLpoly are comparing it to the libraries listed below
- Genetic maps in autopolyploids☆29Updated last month
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆29Updated 6 months ago
- GWAS software that can handle autopolyploids☆28Updated 6 months ago
- SambaR: Snp datA Management and Basic Analyses in R☆28Updated 2 weeks ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluat…☆12Updated 7 years ago
- Repository for speciation genomics website☆25Updated 9 months ago
- ☆24Updated 4 years ago
- ☆39Updated 2 years ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆30Updated last month
- Tutorials for bioinformatics and data analysis related to landscape genomics☆27Updated 6 years ago
- Shiny apps for teaching Population Genetics☆64Updated 2 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆35Updated last month
- ☆31Updated 3 years ago
- ☆34Updated 3 years ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Software for ancestry estimation in unrelated individuals☆18Updated 2 weeks ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆58Updated 6 months ago
- ☆30Updated last week
- Methods for examining PCA locally along the genome.☆78Updated 8 months ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- R functions for generating site frequency spectra (SFS) from a VCF file.☆27Updated 5 years ago
- two-stage analysis of multi-environment trials for genomic selection and GWAS☆26Updated 2 months ago
- ☆13Updated 2 years ago
- RADseq workflow using STACKS☆57Updated last week
- Presentations from the course☆36Updated last year
- biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute☆49Updated 2 months ago
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆32Updated last year
- feature-based deep learning for the identification of selective sweeps☆55Updated this week
- ☆14Updated 4 months ago