jingwanglab / Populus_genomic_prediction_climate_vulnerabilityLinks
☆41Updated 2 years ago
Alternatives and similar repositories for Populus_genomic_prediction_climate_vulnerability
Users that are interested in Populus_genomic_prediction_climate_vulnerability are comparing it to the libraries listed below
Sorting:
- biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute☆54Updated 2 weeks ago
- Documentation for Evolview☆28Updated 3 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆37Updated last year
- Tutorial about R package PopGenome☆41Updated 6 years ago
- Codes for the lettuce resequencing project in 2020☆30Updated 3 years ago
- Automated de novo assembly of whole chloroplast genomes.☆46Updated 9 months ago
- Portable solution to generate genome alignment chains using lastz☆57Updated last month
- Code used to analyse WGS data of giraffe in Coimbra et al. 2021☆11Updated last year
- SambaR: Snp datA Management and Basic Analyses in R☆28Updated last month
- ☆19Updated 2 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- Data and scripts used in the oneKP capstone analyses☆13Updated 3 years ago
- A tool for plotting CAFE5 gene family expansion/contraction result☆31Updated last year
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆42Updated last month
- Methods for examining PCA locally along the genome.☆81Updated 10 months ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆27Updated 5 years ago
- Repository for speciation genomics website☆25Updated 11 months ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆36Updated last week
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆59Updated 8 months ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆28Updated 6 years ago
- Sorting and subsampling phylogenomic datasets☆24Updated 2 months ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆41Updated 9 months ago
- Tutorials on evolutionary genomics☆45Updated 3 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆35Updated last year
- ☆21Updated 5 years ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆71Updated 8 months ago
- Analysis of convergence between organismal traits and DNA/protein sequences☆55Updated last week
- Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV☆16Updated 5 months ago