Tom-Jenkins / mapmixtureLinks
R package and web app for spatial visualisation of admixture on a projected map
☆46Updated 10 months ago
Alternatives and similar repositories for mapmixture
Users that are interested in mapmixture are comparing it to the libraries listed below
Sorting:
- ☆34Updated 4 years ago
- association analysis of distance matrices using gradient forest approach☆16Updated 4 months ago
- A Landscape Genomic Analysis Toolkit in R☆21Updated 2 months ago
- A framework for simulation-based inference in evolutionary biology☆28Updated 3 weeks ago
- BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts☆72Updated 2 months ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆151Updated last month
- JAMP - Just Another Metabarcoding Pipeline☆39Updated 4 years ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆30Updated 7 years ago
- Phylogenetic penalized likelihood☆54Updated 7 months ago
- Shiny apps for teaching Population Genetics☆67Updated 3 years ago
- UCE Bioinformatics Pipeline☆17Updated 4 months ago
- ☆22Updated 2 years ago
- Various functions for analysis of microbial community data☆47Updated 4 months ago
- Transform files to the microtable object with microeco package☆28Updated 3 months ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆69Updated 3 months ago
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆27Updated 3 years ago
- RADseq Data Exploration, Manipulation and Visualization using R☆59Updated 5 months ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆23Updated last year
- r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)☆72Updated 2 years ago
- PHYLOgenomic analysis pipeline for HERBarium specimens☆17Updated 9 months ago
- MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R☆18Updated 5 months ago
- An R package for predicting ploidal level from sequence data using site-based heterozygosity☆18Updated 2 weeks ago
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆17Updated 6 months ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆31Updated 10 months ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆72Updated 4 months ago
- creating reference databases for amplicon sequencing☆46Updated 3 weeks ago
- method for modeling continuous and discrete population genetic structure☆38Updated 2 years ago
- Look Up Guild Information for Fungi in R☆23Updated 10 months ago
- ☆44Updated 3 years ago
- Speedy versions of phyloseq functions☆48Updated last year