googlegenomics / pipelines-api-examples
Examples for the Google Genomics Pipelines API.
☆50Updated 7 years ago
Alternatives and similar repositories for pipelines-api-examples
Users that are interested in pipelines-api-examples are comparing it to the libraries listed below
Sorting:
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- CWL implementation of CloudNeo: A cloud pipeline for identifying patient-specific tumor neoantigens☆19Updated 6 years ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 6 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- A needle plot for mutation data☆26Updated 7 years ago
- SevenBridges Python Api bindings☆46Updated 3 months ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 5 months ago
- A collection of Python clients and accessory scripts for interacting with the Cromwell☆22Updated 2 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- VAPr: A Python package for NoSQL variant data storage, annotation and prioritization☆36Updated 3 years ago
- A new workflow for the custom design of CRISPR libraries.☆21Updated 2 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- A tool to call somatic single nucleotide variants.☆41Updated 9 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆69Updated 2 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆33Updated 2 years ago
- SEQSpark documentation☆18Updated 4 years ago
- Toolkit to analyze genomic variation data, built on the GATK with Clojure☆66Updated 9 years ago
- A proof of concept RNA-Seq pipeline with Nextflow☆33Updated 4 years ago
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆34Updated 8 years ago
- DEPRECATED. This tool has been superseded by https://github.com/griffithlab/pVACtools☆61Updated 6 years ago
- RNA-Seq Snakemake example with Jekyll homepage creation☆20Updated 11 years ago
- Exon-exon splice junctions across SRA☆40Updated 3 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆48Updated 6 years ago
- ☆68Updated 2 years ago
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆64Updated last month
- Library for manipulating genomic variants and predicting their effects☆84Updated 10 months ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- 3D hotspot mutation proximity analysis tool☆47Updated 2 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago