Code to reproduce analyses from the sleuth paper
☆16Nov 20, 2018Updated 7 years ago
Alternatives and similar repositories for sleuth_paper_analysis
Users that are interested in sleuth_paper_analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis from kallisto paper☆32Feb 10, 2016Updated 10 years ago
- Mapping-free variant caller for short-read Illumina data☆21Apr 2, 2020Updated 6 years ago
- ☆12Jul 25, 2019Updated 6 years ago
- A succinct colored dBG representation☆12Sep 11, 2018Updated 7 years ago
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11May 5, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Use gene expression to predict phenotype sample information☆19Feb 13, 2018Updated 8 years ago
- Examples of kallisto + sleuth☆11May 18, 2017Updated 9 years ago
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆30May 19, 2017Updated 9 years ago
- List of conferences with talk videos posted online☆12Sep 23, 2023Updated 2 years ago
- Robust Open Reading Frame prediction (ANGLE re-implementation)☆16Aug 2, 2021Updated 4 years ago
- A Python library for interacting with ENA's API☆25Aug 10, 2021Updated 4 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆19Jun 29, 2022Updated 4 years ago
- variant integration methods for the 1000 Genomes Project☆21Jan 16, 2018Updated 8 years ago
- Differential analysis of RNA-Seq☆316May 28, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- haplotypes genotypes and alleles example decision synthesizer☆20Jun 13, 2019Updated 7 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- robust matching of small variant datasets using flexible scoring schemes☆12Mar 26, 2020Updated 6 years ago
- Automated pipeline for amplicon sequence analysis☆11Nov 25, 2025Updated 7 months ago
- Unix-based RNA-seq quantification pipeline☆10Nov 18, 2015Updated 10 years ago
- Software for exploration of gene expression data from single-cell RNA sequencing.☆28Jun 20, 2019Updated 7 years ago
- ☆18Sep 4, 2024Updated last year
- A minimal and serverless data pipeline☆13Feb 22, 2022Updated 4 years ago
- Frontend repository for COVID-19 self-reporting tool in React☆10Aug 2, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- Graphite - Graph-based variant adjudication☆28Feb 9, 2021Updated 5 years ago
- A RepSeq processing swiss-knife☆43Mar 29, 2024Updated 2 years ago
- The website for bioboxes☆11Jun 9, 2017Updated 9 years ago
- Brain-related -omics data☆28Mar 21, 2026Updated 4 months ago
- Population-scale detection of novel sequence insertions☆28Aug 16, 2022Updated 3 years ago
- Scripts☆10Jun 29, 2016Updated 10 years ago
- VariantStore: A Large-Scale Genomic Variant Search Index☆40Jul 9, 2021Updated 5 years ago
- A R Bioconductor package for accessing MyGene.info services☆11Jun 22, 2018Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Immuological gene typing and annotation for genome assembly☆40Mar 13, 2025Updated last year
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 5 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Sep 20, 2023Updated 2 years ago
- Python script for on-demand pushing from Pocket to Kindle.☆10Jun 25, 2014Updated 12 years ago
- A Python interface to the Ensembl REST APIs, biological data at your fingertips.☆11Apr 17, 2024Updated 2 years ago
- PopSTR - A Population based microsatellite genotyper☆33Oct 23, 2023Updated 2 years ago
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆36Jul 1, 2026Updated 3 weeks ago