googlegenomics / grid-computing-tools
Scripts and samples for using Grid Engine on Google Cloud Platform.
☆13Updated 7 years ago
Alternatives and similar repositories for grid-computing-tools:
Users that are interested in grid-computing-tools are comparing it to the libraries listed below
- ☆9Updated 8 years ago
- Tutorial on programming or "big data"/bioinformatics☆32Updated 7 years ago
- Write-once-read-many table for large datasets.☆27Updated last year
- Image and VM management for Jenkins, Spark and Mesos clusters in EC2☆22Updated 4 years ago
- BigDataScript: Scirpting language for big data☆92Updated 4 years ago
- Docker containers that demonstrate a proof of concept bwa alignment workflow☆14Updated 10 years ago
- Tools for developing and running pipelines with the Genomics API☆24Updated 5 years ago
- The SnoVault general purpose hybrid object-relational database☆16Updated last year
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 4 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Updated 8 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Updated 9 years ago
- MaRe leverages the power of Docker and Spark to run and scale your serial tools in MapReduce fashion.☆14Updated 2 years ago
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Updated 4 years ago
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Updated 8 years ago
- Example Cloud Datalab iPython Notebooks for genomics use cases.☆25Updated 7 years ago
- Spark VCF data source implementation for Dataframes☆14Updated 2 years ago
- Target discovery platform for exploring rankings of genes, disease models, and other entities. @JKU-ICG @datavisyn☆12Updated last year
- A tool for running bioinformatics workflows locally or in the cloud.☆30Updated 5 years ago
- Defunct. Use https://github.com/Linuxbrew/docker☆14Updated 8 years ago
- Library for graph-like storage in postgresql using sqlalchemy☆22Updated this week
- A command line tool that uses a Boolean calculus of calendars for computing availability (currently supports Google Calendar API)☆25Updated 3 years ago
- Go implementation of ntHash☆20Updated 3 years ago
- BioAssay Research Database☆20Updated 6 years ago
- BITS: Binary Interval Search☆25Updated 7 years ago
- Exercises for training scientists to perform some RNA-seq analyses.☆11Updated 5 years ago
- Gene Expression Atlas☆21Updated 2 years ago
- Core consonance utilities for scheduling, reporting on, and provisioning VMs for workflows☆14Updated 6 years ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- Minhash and maxhash library in Python, combining flexibility, expressivity, and performance.☆21Updated 3 months ago
- python stuff I use☆19Updated 5 years ago