angy89 / RobustSparseCorrelation
This is the R implementation of a robust correlation matrix estimator usefull in case of high-dimensional data to remove the bias. It also implement an adaptive thresholding technique based on cross validation tecnique to regularize the correlation matrix.
☆13Updated 5 years ago
Alternatives and similar repositories for RobustSparseCorrelation:
Users that are interested in RobustSparseCorrelation are comparing it to the libraries listed below
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆20Updated last year
- R/Shiny package for network-integrated pathway enrichment analysis☆14Updated 4 years ago
- Various Ideas for Confounder Adjustment in Regression☆23Updated last year
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 3 months ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- Single sample network reconstruction in R☆21Updated 4 years ago
- Volume-regularized NMF☆17Updated 2 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 5 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated 3 months ago
- PAthway Representation and Analysis by Direct Inference on Graphical Models☆44Updated 7 years ago
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11Updated 4 years ago
- ☆16Updated 6 years ago
- Comparison of dimensionality reduction methods☆30Updated 4 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆25Updated last year
- Core utilities for single-cell RNA-seq☆12Updated 2 months ago
- A R package for Grade of Membership model and Visualization of counts data:☆31Updated 4 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆12Updated 6 years ago
- GWAS gold standards repository☆31Updated last year
- ☆19Updated 7 years ago
- Introduction to single-cell RNA-Seq analysis workshop☆15Updated 8 years ago
- Toolbox package for organizing and working with TCGA data☆26Updated 2 months ago
- Modelling DNA methylation profiles☆22Updated 4 years ago
- Mutational Signature Comprehensive Analysis Toolkit☆13Updated 3 weeks ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Interactive benchmarking of ranking and assignment methods☆14Updated last month
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- Interface to 10x Genomics' 1.3 m single cell data set☆18Updated 6 years ago
- ☆15Updated 4 years ago
- ☆17Updated 9 months ago
- Tutorial for the analysis of scRNA-seq data in R☆18Updated 6 years ago