biocompute-objects / BCO_DocumentationLinks
Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:
☆17Updated last year
Alternatives and similar repositories for BCO_Documentation
Users that are interested in BCO_Documentation are comparing it to the libraries listed below
Sorting:
- hail-based pipelines for annotating variant callsets and exporting them to elasticsearch☆23Updated last week
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 7 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- Scalable RNA-seq analysis☆73Updated 4 years ago
- conda recipes for genomic data☆85Updated 4 years ago
- CWL implementation of CloudNeo: A cloud pipeline for identifying patient-specific tumor neoantigens☆19Updated 6 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 3 months ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 6 years ago
- User-friendly Bioinformatics Tools☆18Updated 4 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 5 years ago
- Analysis from kallisto paper☆32Updated 9 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- A python tool for parsing pedigree files☆16Updated 8 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- An algorithm for clonal tree reconstruction from multi-sample cancer sequencing data☆14Updated 7 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- Repository for resources we'd like to share with the community.☆24Updated 3 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆71Updated 2 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- Website to analyze conflicting assertions in ClinVar☆18Updated last year
- Allele frequency filter app☆14Updated 3 years ago
- CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria☆28Updated last month
- Exon-exon splice junctions across SRA☆42Updated 4 years ago