Configure Vitessce using existing Scverse plotting APIs
☆25Aug 7, 2026Updated this week
Alternatives and similar repositories for easy_vitessce
Users that are interested in easy_vitessce are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Updated this week
- ☆18May 15, 2026Updated 2 months ago
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 4 months ago
- A Python package for unsupervised analysis of spatial (prote)omics data.☆19Jul 23, 2026Updated 2 weeks ago
- Automatically annotate cell types, consistently across samples.☆27Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆77Jul 28, 2026Updated last week
- A modern Python library for converting Mass Spectrometry Imaging (MSI) data into standardized SpatialData/Zarr format, enabling seamless …☆22Updated this week
- Python API and Jupyter widget for Vitessce☆67Jul 30, 2026Updated last week
- Fast array utilities☆15Updated this week
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆18Aug 3, 2026Updated last week
- Multi-Dimensional Visualization (MDV) is an open-source toolkit for analyzing and visualizing spatial and molecular datasets. Code licens…☆37Updated this week
- High-Performance Sparse Matrix Library☆19Nov 23, 2025Updated 8 months ago
- Spatial and multiomic visualization and analysis library☆28Updated this week
- Multimodal Data (.h5mu) implementation for Python☆129Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆68Updated this week
- Interactive and integrated analysis of multiplexed tissue microarrays☆15Updated this week
- A CodecPipeline for zarr-python backed by the zarrs Rust crate☆78Updated this week
- scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images☆110Updated this week
- ☆31Updated this week
- ☆11Updated this week
- A rust implementation of STAR☆70Updated this week
- parallel differential expression for single-cell perturbation sequencing☆25Jul 14, 2026Updated 3 weeks ago
- Read-only JavaScript/TypeScript reader for Icechunk repositories, designed for use with zarrita.☆21Jun 24, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- a dataloader to work with large single cell datasets from lamindb☆41May 20, 2026Updated 2 months ago
- A federated implementation of PyDESeq2, based on Substra.☆18Updated this week
- Single-cell spatial omics analysis that makes you happy!☆70Updated this week
- A multi-dimensional spatial image data structure for scientific Python.☆44Aug 8, 2025Updated last year
- Build contrasts for models defined with formulaic☆13Updated this week
- An open and interoperable data framework for spatial omics data☆383Updated this week
- Facilitating the use of Deep Visual Proteomics☆17Jan 16, 2026Updated 6 months ago
- UniFORM: Towards Universal ImmunoFluorescence Normalization for Multiplex Tissue Imaging☆18Jul 30, 2025Updated last year
- Search- and quantification-engine agnostic biological interpretation of proteomics data☆25Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆38Jul 31, 2026Updated last week
- Vitessce is a visual integration tool for exploration of spatial single-cell experiments.☆263Updated this week
- Interoperability between SpatialData and the Xenium Explorer☆26Jul 31, 2024Updated 2 years ago
- Domain-agnostic Zarr convention for encoding multiscale pyramid information☆24Jun 12, 2026Updated last month
- Accessible and interoperable whole slide image analysis☆315Jul 28, 2026Updated last week
- Robust and efficient analysis of single-cell perturbation studies☆15Updated this week
- Shadow objects for AnnData and MuData (experimental)☆11Feb 28, 2025Updated last year