ome / omero-webLinks
Django-based OMERO.web client
☆21Updated last month
Alternatives and similar repositories for omero-web
Users that are interested in omero-web are comparing it to the libraries listed below
Sorting:
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated this week
- Browse your OMERO database from within napari.☆38Updated 3 weeks ago
- Raw format to OME-TIFF converter☆55Updated 2 weeks ago
- Multiple file format reading directly into napari using pure Python☆37Updated last year
- Bio-Formats image file format to raw format converter☆97Updated 2 weeks ago
- A relabeling tool for tiled segmentation with Dask☆16Updated last year
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated 10 months ago
- ☆12Updated last year
- Image registration (alignment) software for large microscopy images☆25Updated last year
- A napari plugin for zarr backed OME-NGFF images☆37Updated last week
- GIve easy, high-level access to ome-zarr fileset☆20Updated this week
- Command-line client for Fractal☆46Updated this week
- Running compute-intense parts of BigStitcher distributed☆26Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 5 months ago
- Accurate and efficient spot detection for microscopy data☆100Updated this week
- Python libraries for loading, running and packaging bioimage.io models☆33Updated this week
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆38Updated 3 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 11 months ago
- Pure Python library for reading NIS Elements ND2 images and metadata☆47Updated 8 months ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆151Updated last month
- Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction☆69Updated 2 weeks ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 months ago
- OMERO.server production docker image☆16Updated 2 months ago
- ☆13Updated this week
- MethodsJ2☆14Updated 3 years ago
- ☆86Updated 6 months ago
- Whole slide image registration through wsireg in napari.☆12Updated 2 years ago
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆135Updated 5 years ago
- Tool for precise, interactive, fast and scalable FISH spot detection☆50Updated 7 months ago
- ☆32Updated last year