Alternatives and similar repositories for omero-server-docker

Users that are interested in omero-server-docker are comparing it to the libraries listed below

• TheJacksonLaboratory / ezomero
  A module with convenience functions for writing Python code that interacts with OMERO.
  ☆45Updated last week
• ABIF-McGill / MethodsJ2
  MethodsJ2
  ☆14Updated 3 years ago
• tlambert03 / napari-omero
  Browse your OMERO database from within napari.
  ☆38Updated last week
• AllenCellModeling / napari-aicsimageio
  Multiple file format reading directly into napari using pure Python
  ☆37Updated 11 months ago
• mobie / mobie-viewer-fiji
  ☆37Updated last month
• piximi / piximi
  A browser-based deep learning tool for image annotation, segmentation, classification, and measurement.
  ☆34Updated last week
• glencoesoftware / bioformats2raw
  Bio-Formats image file format to raw format converter
  ☆94Updated last month
• glencoesoftware / raw2ometiff
  Raw format to OME-TIFF converter
  ☆54Updated last month
• ome-zarr-models / ome-zarr-models-py
  A minimal Python package for reading OME-Zarr (meta)data
  ☆31Updated last month
• fractal-analytics-platform / fractal-client
  Command-line client for Fractal
  ☆46Updated this week
• haesleinhuepf / awesome-napari-plugins-that-are-not-on-the-napari-hub-yet
  ☆24Updated 2 years ago
• glencoesoftware / NGFF-Converter
  NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF
  ☆28Updated last year
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆43Updated 2 months ago
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆57Updated last week
• bioio-devs / bioio
  Image reading, metadata management, and image writing for Microscopy images in Python
  ☆92Updated 2 weeks ago
• bioimagebook / bioimagebook.github.io
  An introduction to bioimage analysis - http://bioimagebook.github.io
  ☆71Updated 2 weeks ago
• NL-BioImaging / biomero
  BIOMERO - A python library for easy connecting between OMERO (jobs) and a Slurm cluster
  ☆17Updated 3 months ago
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆17Updated 2 months ago
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated 11 months ago
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆23Updated 4 months ago
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆33Updated 3 weeks ago
• ksugar / qupath-extension-cellsparse
  QuPath extension for Cellsparse
  ☆19Updated 2 months ago
• fmicompbio / ez_zarr
  GIve easy, high-level access to ome-zarr fileset
  ☆17Updated last month
• haesleinhuepf / devbio-napari
  ☆51Updated 2 months ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆87Updated this week
• haesleinhuepf / napari-skimage-regionprops
  Feature extraction for labeled objects in images using regionprops from scikit-image
  ☆50Updated 2 months ago
• bioimage-io / core-bioimage-io-python
  Python libraries for loading, running and packaging bioimage.io models
  ☆32Updated this week
• stardist / stardist-napari
  StarDist plugin for napari
  ☆38Updated 10 months ago
• TheJacksonLaboratory / dask_relabeling
  A relabeling tool for tiled segmentation with Dask
  ☆16Updated 9 months ago
• ome / ngff
  Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
  ☆135Updated last month