ome / omero-server-dockerLinks
OMERO.server production docker image
☆16Updated last month
Alternatives and similar repositories for omero-server-docker
Users that are interested in omero-server-docker are comparing it to the libraries listed below
Sorting:
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated 3 weeks ago
- MethodsJ2☆14Updated 3 years ago
- GIve easy, high-level access to ome-zarr fileset☆22Updated 3 months ago
- BIOMERO.analyzer - A python library for easy connecting between OMERO (jobs) and a Slurm cluster☆24Updated last week
- Browse your OMERO database from within napari.☆39Updated 3 weeks ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 9 months ago
- ☆41Updated last week
- Multiple file format reading directly into napari using pure Python☆39Updated 2 months ago
- Raw format to OME-TIFF converter☆56Updated last month
- Bio-Formats image file format to raw format converter☆102Updated last week
- A napari plugin for zarr backed OME-NGFF images☆42Updated 2 weeks ago
- native Python dataclasses for the OME data model☆65Updated 2 weeks ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆160Updated 4 months ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆36Updated this week
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated last year
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆35Updated last month
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆55Updated this week
- Django-based OMERO.web client☆23Updated 3 weeks ago
- ☆91Updated last month
- A relabeling tool for tiled segmentation with Dask☆17Updated last year
- An introduction to bioimage analysis - http://bioimagebook.github.io☆76Updated 4 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45Updated 7 months ago
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆151Updated 2 months ago
- Image registration (alignment) software for large microscopy images☆27Updated 2 years ago
- ☆14Updated 2 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 3 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 3 weeks ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 7 months ago
- A napari plugin for clustering objects according to their properties.☆88Updated last week
- Python libraries for loading, running and packaging bioimage.io models☆34Updated last week