VolkerH / DaskFusionLinks
Fusing image tiles with dask array's map_blocks
☆31Updated last year
Alternatives and similar repositories for DaskFusion
Users that are interested in DaskFusion are comparing it to the libraries listed below
Sorting:
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Updated 2 months ago
- A 3D interactivity toolbox for napari☆37Updated 7 months ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 10 months ago
- ☆23Updated 4 years ago
- python tools for BigDataViewer☆22Updated last year
- native Python dataclasses for the OME data model☆65Updated last week
- Python module for registering and fusing multi-view microscopy data☆24Updated 11 months ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last month
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆88Updated this week
- ilastik plugin for napari☆14Updated last month
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 4 years ago
- Use Napari Viewer to display CZI images☆11Updated 3 years ago
- A napari plugin for zarr backed OME-NGFF images☆43Updated 3 weeks ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆36Updated last week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Updated 7 months ago
- A plugin to read whole slide images within napari.☆21Updated 2 months ago
- Optimize image processing workflows in napari☆17Updated 9 months ago
- 1d plotting in napari-based canvas.☆25Updated 2 weeks ago
- serve Zarr datasets via HTTP☆31Updated 2 years ago
- Pydantic models for OME-NGFF☆24Updated 4 months ago
- High quality visualization for volumetric image data☆55Updated last week
- scalable multiscale image pyramids in python☆29Updated last year
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆63Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆21Updated 3 months ago
- ImageJ convenience layer for N5☆19Updated this week
- ☆18Updated this week
- Experimental micro-service for implementing the Zarr spec over HTTP☆20Updated 3 weeks ago
- Browse your OMERO database from within napari.☆40Updated 3 weeks ago
- Napari gaming☆17Updated 4 years ago