glencoesoftware / isyntax2raw

Related projects ⓘ

Alternatives and complementary repositories for isyntax2raw

• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆74Updated this week
• imi-bigpicture / wsidicomizer
  Python library for converting WSI files to DICOM
  ☆60Updated this week
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆59Updated 3 months ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆28Updated 9 months ago
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆32Updated 3 weeks ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆52Updated 4 months ago
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆57Updated this week
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆110Updated last week
• DigitalSlideArchive / HistomicsStream
  A whole-slide image reader for TensorFlow
  ☆22Updated last month
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆58Updated 3 years ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆33Updated 10 months ago
• Booritas / slideio
  ☆59Updated last week
• GoogleCloudPlatform / wsi-to-dicom-converter
  Conversion tool/library for converting whole slide images to DICOM
  ☆77Updated 6 months ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆19Updated last year
• amspath / slidescape
  ☆24Updated last month
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆29Updated 3 years ago
• ImagingDataCommons / slim
  Interoperable web-based slide microscopy viewer and annotation tool
  ☆120Updated this week
• Bayer-Group / tiffslide
  TiffSlide - cloud native openslide-python replacement based on tifffile
  ☆85Updated 8 months ago
• KatherLab / preProcessing
  ☆43Updated last year
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆122Updated 4 months ago
• choosehappy / PatchSorter
  A tool for rapidly labeling objects using deep learning feature embedding
  ☆27Updated 2 months ago
• sara-nl / multi-scale-tools
  ☆17Updated 3 years ago
• tand826 / wsiprocess
  Whole Slide Image (WSI) Processing Library for Histopathological / Cytopathological Machine Learning Tasks
  ☆23Updated last year
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆46Updated last month
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆51Updated 2 years ago
• manzt / napari-lazy-openslide
  Lazily load multiscale whole-slide images with openslide and dask
  ☆33Updated last year
• smujiang / WSI2DICOM
  Simple prototype of converting whole slide image (WSI) to multiframe DICOM images
  ☆14Updated last year
• AICAN-Research / H2G-Net
  🚀 H2G-Net: Segmentation of breast cancer region from whole slide images
  ☆22Updated last week
• haranrk / DigiPathAI
  Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
  ☆65Updated last year
• cytomine / Cytomine-bootstrap
  Cytomine Community Edition Legacy
  ☆35Updated last year