Alternatives and similar repositories for isyntax2raw

Users that are interested in isyntax2raw are comparing it to the libraries listed below

• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆76Updated last week
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated 2 weeks ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆38Updated last year
• DigitalSlideArchive / HistomicsStream
  A whole-slide image reader for TensorFlow
  ☆24Updated this week
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆130Updated last week
• imi-bigpicture / wsidicomizer
  Python library for converting WSI files to DICOM
  ☆79Updated last month
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆87Updated last week
• Bayer-Group / tiffslide
  TiffSlide - cloud native openslide-python replacement based on tifffile
  ☆103Updated 5 months ago
• kaiko-ai / towards_large_pathology_fms
  This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…
  ☆34Updated 10 months ago
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• SarderLab / tf-WSI-dataset-utils
  An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow
  ☆14Updated 4 years ago
• Booritas / slideio
  ☆72Updated last week
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆107Updated 3 weeks ago
• GoogleCloudPlatform / wsi-to-dicom-converter
  Conversion tool/library for converting whole slide images to DICOM
  ☆84Updated 10 months ago
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆126Updated 3 months ago
• nadeemlab / ImPartial
  Interactive deep learning whole-cell segmentation and thresholding using partial annotations
  ☆40Updated 3 months ago
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆33Updated 5 years ago
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆61Updated 3 years ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆56Updated last year
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆139Updated last year
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆23Updated 2 years ago
• ImagingDataCommons / slim
  Interoperable web-based DICOM slide microscopy viewer and annotation tool
  ☆150Updated last week
• sara-nl / multi-scale-tools
  ☆19Updated 4 years ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• PathologyDataScience / HistomicsML2
  A tool for training machine-learning models with whole-slide imaging datasets
  ☆26Updated last year
• jamesdolezal / synthetic-histology
  Synthetic histology using GANs, for deep learning model explainability and trainee education.
  ☆16Updated last year
• kaiko-ai / eva
  Evaluation framework for oncology foundation models (FMs)
  ☆141Updated this week
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆84Updated last year
• imi-bigpicture / wsidicom
  Python package for reading DICOM WSI file sets.
  ☆45Updated last week
• RTLucassen / slidesegmenter
  A Python package for tissue and pen marking segmentation on low-magnification (1.25x) whole slide images.
  ☆15Updated last month