Alternatives and similar repositories for isyntax2raw

Users that are interested in isyntax2raw are comparing it to the libraries listed below

• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆37Updated this week
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆33Updated last year
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆32Updated 4 years ago
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆72Updated this week
• kaiko-ai / towards_large_pathology_fms
  This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…
  ☆29Updated 5 months ago
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆71Updated 11 months ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆78Updated last week
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆124Updated last week
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆35Updated last year
• GoogleCloudPlatform / wsi-to-dicom-converter
  Conversion tool/library for converting whole slide images to DICOM
  ☆82Updated 5 months ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆21Updated last year
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆53Updated last year
• kevindehaan / stain-transformation
  ☆40Updated 3 years ago
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆117Updated 6 months ago
• sara-nl / multi-scale-tools
  ☆18Updated 3 years ago
• imi-bigpicture / wsidicomizer
  Python library for converting WSI files to DICOM
  ☆75Updated 2 weeks ago
• DigitalSlideArchive / HistomicsStream
  A whole-slide image reader for TensorFlow
  ☆24Updated 8 months ago
• KatherLab / preProcessing
  ☆45Updated 2 years ago
• Booritas / slideio
  ☆69Updated last week
• NHPatterson / wsireg
  multimodal whole slide image registration in a graph structure
  ☆87Updated 11 months ago
• ksugar / qupath-extension-sam
  QuPath extension for Segment Anything Model (SAM)
  ☆109Updated 3 months ago
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆32Updated last year
• DIAGNijmegen / pathology-hooknet
  ☆61Updated 9 months ago
• Pathomation / pma_python
  Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy
  ☆30Updated 6 months ago
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆56Updated 2 years ago
• Bayer-Group / tiffslide
  TiffSlide - cloud native openslide-python replacement based on tifffile
  ☆103Updated 3 weeks ago
• jopo666 / HistoEncoder
  ☆42Updated 7 months ago
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆134Updated last year
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆49Updated 3 months ago
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆102Updated 7 months ago